RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 CRACR2BQ8N4Y2 399 aaPredicted RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 ZBTB8BQ8NAP8 495 aaPredicted RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 ANKRD52Q8NB46 1076 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 MYLIPQ8WY64 445 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 HSPH1Q92598 858 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TUBGCP3Q96CW5 907 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ZDHHC15Q96MV8 337 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CATSPER2Q96P56 530 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TCF25Q9BQ70 676 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ARHGAP39Q9C0H5 1083 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 RNF32Q9H0A6 362 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 GBP3Q9H0R5 595 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 GHITMQ9H3K2 345 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 C19orf44Q9H6X5 657 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 IFT22Q9H7X7 185 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 CRLF2Q9HC73 371 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 ITM2CQ9NQX7 267 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TJP2Q9UDY2 1190 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 MTRF1LQ9UGC7 380 aaKnown RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 EBF1Q9UH73 591 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 TMEM59LQ9UK28 342 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.04□□□□□ -1.28
COPS3-216ENST00000579716 NINLQ9Y2I6 1382 aa7.04□□□□□ -1.28
COPS3-216ENST00000579716 PEG3Q9GZU2 1588 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 CGNL1Q0VF96 1302 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 TTC21BQ7Z4L5 1316 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 A0A1W2PPH5 198 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 PGPEP1LA6NFU8 196 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 GOLGA6L19H0YKK7 550 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 ZEB2O60315 1214 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 TSPAN1O60635 241 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 SEC22BO75396 215 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 URI1O94763 535 aaPredicted RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 OLFM2O95897 454 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 NPPAP01160 153 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 HRGP04196 525 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 POU2F2P09086 479 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 PDHBP11177 359 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 PYGMP11217 842 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 SRFP11831 508 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 SDSP20132 328 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 HOXA11P31270 313 aaPredicted RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 MC4RP32245 332 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 ACTN2P35609 894 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 MAP2K2P36507 400 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 RNASE9P60153 205 aaKnown RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 HAND2P61296 217 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 GALNT1Q10472 559 aaPredicted RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 IQCB1Q15051 598 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 MAJINQ3KP22 176 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 TBC1D25Q3MII6 688 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 BBS9Q3SYG4 887 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 CFAP221Q4G0U5 840 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 CCDC40Q4G0X9 1142 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 XKR9Q5GH70 373 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 KCNT1Q5JUK3 1230 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 WIPI1Q5MNZ9 446 aaPredicted RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 ZBTB41Q5SVQ8 909 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 NAA16Q6N069 864 aaPredicted RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 C8orf74Q6P047 294 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 FBXL19Q6PCT2 694 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 ATF7IPQ6VMQ6 1270 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 OR2C3Q8N628 320 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 DNAJB8Q8NHS0 232 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 GDAP1Q8TB36 358 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 SLC35G2Q8TBE7 412 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 TRAPPC12Q8WVT3 735 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 ARL5BQ96KC2 179 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 RIPOR3Q96MK2 946 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 CLUHP3Q96NS8 147 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 ACAP3Q96P50 834 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 TMEM237Q96Q45 408 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 YME1L1Q96TA2 773 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 CCDC106Q9BWC9 280 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 APOL5Q9BWW9 433 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 FOXP3Q9BZS1 431 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 MCOLN1Q9GZU1 580 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 BRD8Q9H0E9 1235 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 WNT5BQ9H1J7 359 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 GPR108Q9NPR9 543 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 HAUS2Q9NVX0 235 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 ADPRHL2Q9NX46 363 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 SIRT5Q9NXA8 310 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 UBP1Q9NZI7 540 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 SUCLA2Q9P2R7 463 aaPredicted RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 SUCOQ9UBS9 1254 aaKnown RBP7.03□□□□□ -1.28
COPS3-216ENST00000579716 VPS28Q9UK41 221 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 MED16Q9Y2X0 877 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 PCDHB5Q9Y5E4 795 aa7.03□□□□□ -1.28
COPS3-216ENST00000579716 MAP3K19Q56UN5 1328 aa7.02□□□□□ -1.28
COPS3-216ENST00000579716 RSF1Q96T23 1441 aaPredicted RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 KRT87PA6NCN2 255 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 POLR2DO15514 142 aaKnown RBP7.02□□□□□ -1.29
COPS3-216ENST00000579716 TTI1O43156 1089 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 PRPSAP2O60256 369 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 GRIN3BO60391 1043 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 DOK2O60496 412 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 ABCG1P45844 678 aa7.02□□□□□ -1.29
COPS3-216ENST00000579716 NR2C2P49116 596 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms