RNA–Protein interactions for RNA: ENST00000579632.5

CDK5RAP3-214, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-214ENST00000579632 FXR1P51114 621 aaKnown RBP eCLIP11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 HTRA4P83105 476 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 APBA1Q02410 837 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 RAPGEF1Q13905 1077 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ARID5BQ14865 1188 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 IQCEQ6IPM2 695 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 RRAGAQ7L523 313 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DPH6Q7L8W6 267 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ZNF280BQ86YH2 543 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ARHGEF19Q8IW93 802 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 BAP1Q92560 729 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TATDN2Q93075 761 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 RAD9AQ99638 391 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 COLEC11Q9BWP8 271 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 BCO2Q9BYV7 579 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 NRDE2Q9H7Z3 1164 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 RC3H2Q9HBD1 1191 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 NLRC4Q9NPP4 1024 aa11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 CXXC1Q9P0U4 656 aaPredicted RBP11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 NXF1Q9UBU9 619 aaKnown RBP11.3□□□□□ -0.6
CDK5RAP3-214ENST00000579632 F8VZ95 297 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PPEF2O14830 753 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TRAPPC3O43617 180 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PTMAP06454 111 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 GALTP07902 379 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 HNRNPH3P31942 346 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 STAT1P42224 750 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ASPAP45381 313 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 OR1G1P47890 313 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 AARSP49588 968 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 GATMP50440 423 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 JAM2P57087 298 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 BTG3Q14201 252 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DRAP1Q14919 205 aaPredicted RBP11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 GJB7Q6PEY0 223 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 HERC6Q8IVU3 1022 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TOP6BLQ8N6T0 577 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SPATA18Q8TC71 538 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 KREMEN1Q96MU8 473 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PANX2Q96RD6 677 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 MMS19Q96T76 1030 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DNAJC7Q99615 494 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DNAI2Q9GZS0 605 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■■■□ 21
CDK5RAP3-214ENST00000579632 ABHD10Q9NUJ1 306 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ZNHIT6Q9NWK9 470 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 AIPL1Q9NZN9 384 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DSEQ9UL01 958 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 FAN1Q9Y2M0 1017 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SNX9Q9Y5X1 595 aa11.29□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TANC1Q9C0D5 1861 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 CYB561D2O14569 222 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 NRP1O14786 923 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SPTLC1O15269 473 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 HUS1O60921 280 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TACC1O75410 805 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TADA2AO75478 443 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 LAG3P18627 525 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SOX5P35711 763 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ADKP55263 362 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 BCAR1P56945 870 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 ARHGAP44Q17R89 818 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PAN2Q504Q3 1202 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SFMBT2Q5VUG0 894 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 FAM117BQ6P1L5 589 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PDXDC1Q6P996 788 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DSTYKQ6XUX3 929 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 CCDC186Q7Z3E2 898 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 LIMS2Q7Z4I7 341 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 TC2NQ8N9U0 490 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 APPL2Q8NEU8 664 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 SHC3Q92529 594 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 RNPC3Q96LT9 517 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 GDF15Q99988 308 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PAAF1Q9BRP4 392 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 UBE2OQ9C0C9 1292 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 CISHQ9NSE2 258 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 DNAJB4Q9UDY4 337 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 STK39Q9UEW8 545 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 CNTN6Q9UQ52 1028 aa11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 BZW2Q9Y6E2 419 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-214ENST00000579632 LRRC53A6NM62 1247 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 H0YGN5 161 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 RNF225M0QZC1 329 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 M0QZQ0 153 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 FOXN3O00409 490 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 NRDCO43847 1150 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 TLL1O43897 1013 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 B4GALT3O60512 393 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 KIF4AO95239 1232 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 WEE2P0C1S8 567 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 ODC1P11926 461 aa11.27□□□□□ -0.61
CDK5RAP3-214ENST00000579632 FERP16591 822 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms