RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ADAM12O43184 909 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 CYP2J2P51589 502 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 TFAMQ00059 246 aaKnown RBP25.88■■□□□ 1.73
LIMD2-207ENST00000579329 SNW1Q13573 536 aaKnown RBP25.88■■□□□ 1.73
LIMD2-207ENST00000579329 MRPL58Q14197 206 aaKnown RBP25.88■■□□□ 1.73
LIMD2-207ENST00000579329 KCNB1Q14721 858 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 ZNF280DQ6N043 979 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 GPR149Q86SP6 731 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 CBWD2Q8IUF1 395 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 XXYLT1Q8NBI6 393 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 ENGASEQ8NFI3 743 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 PDE11AQ9HCR9 933 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 CDH22Q9UJ99 828 aa25.88■■□□□ 1.73
LIMD2-207ENST00000579329 KIF20AO95235 890 aa25.87■■□□□ 1.73
LIMD2-207ENST00000579329 WEE2P0C1S8 567 aa25.87■■□□□ 1.73
LIMD2-207ENST00000579329 LILRA4P59901 499 aa25.87■■□□□ 1.73
LIMD2-207ENST00000579329 SLC8B1Q6J4K2 584 aa25.87■■□□□ 1.73
LIMD2-207ENST00000579329 C15orf39Q6ZRI6 1047 aa25.87■■□□□ 1.73
LIMD2-207ENST00000579329 ZDHHC7Q9NXF8 308 aa25.87■■□□□ 1.73
LIMD2-207ENST00000579329 ARHGEF37A1IGU5 675 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 TAF6P49848 677 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 SNRNP35Q16560 246 aaKnown RBP25.86■■□□□ 1.73
LIMD2-207ENST00000579329 CTXN3Q4LDR2 81 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 LIN9Q5TKA1 542 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 RSPO2Q6UXX9 243 aaPredicted RBP25.86■■□□□ 1.73
LIMD2-207ENST00000579329 CYP26C1Q6V0L0 522 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 ALYREFQ86V81 257 aaKnown RBP25.86■■□□□ 1.73
LIMD2-207ENST00000579329 ZNF560Q96MR9 790 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 TIGD1Q96MW7 591 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 RHOBTB2Q9BYZ6 727 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 POMKQ9H5K3 350 aa25.86■■□□□ 1.73
LIMD2-207ENST00000579329 MTCL1Q9Y4B5 1905 aaKnown RBP25.85■■□□□ 1.73
LIMD2-207ENST00000579329 CCDC195A0A1B0GUA6 201 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 TBC1D4O60343 1298 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 RFPL2O75678 378 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 ZMYND10O75800 440 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 TMEM191BP0C7N4 346 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 ODC1P11926 461 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 TYMPP19971 482 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 YWHAHQ04917 246 aaPredicted RBP25.85■■□□□ 1.73
LIMD2-207ENST00000579329 USP37Q86T82 979 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 SENP8Q96LD8 212 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 FBXL5Q9UKA1 691 aa25.85■■□□□ 1.73
LIMD2-207ENST00000579329 LOC730098B7Z3J9 87 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 PDXKO00764 312 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 SPTLC1O15269 473 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 PAPLNO95428 1278 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 PNPLA4P41247 253 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 ROR1Q01973 937 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 PNOCQ13519 176 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 SV2CQ496J9 727 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 C1orf127Q8N9H9 656 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 RDH13Q8NBN7 331 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 ANKRD36BP1Q96IX9 119 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 RPGRIP1Q96KN7 1286 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 OXCT2Q9BYC2 517 aaPredicted RBP25.84■■□□□ 1.73
LIMD2-207ENST00000579329 KCTD10Q9H3F6 313 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 INTS13Q9NVM9 706 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 HOOK1Q9UJC3 728 aaKnown RBP25.84■■□□□ 1.73
LIMD2-207ENST00000579329 ITGA11Q9UKX5 1188 aa25.84■■□□□ 1.73
LIMD2-207ENST00000579329 TIMM13Q9Y5L4 95 aaPredicted RBP25.84■■□□□ 1.73
LIMD2-207ENST00000579329 EXOC3O60645 756 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 OAZ2O95190 189 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 ITGB3P05106 788 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 ALADP13716 330 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 POLR2BP30876 1174 aaKnown RBP25.83■■□□□ 1.73
LIMD2-207ENST00000579329 WDR49Q8IV35 697 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 FEZF2Q8TBJ5 459 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 SMG7Q92540 1137 aaKnown RBP25.83■■□□□ 1.73
LIMD2-207ENST00000579329 MTMR12Q9C0I1 747 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 RMND1Q9NWS8 449 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 NR2E1Q9Y466 385 aa25.83■■□□□ 1.73
LIMD2-207ENST00000579329 C5orf42Q9H799 3197 aa25.83■■□□□ 1.72
LIMD2-207ENST00000579329 TNNC2P02585 160 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 C8AP07357 584 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 HNRNPA1P09651 372 aaKnown RBP eCLIP25.82■■□□□ 1.72
LIMD2-207ENST00000579329 ARPP19P56211 112 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 CYP24A1Q07973 514 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 PSMD6Q15008 389 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 PPM1LQ5SGD2 360 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 LMBRD2Q68DH5 695 aaPredicted RBP25.82■■□□□ 1.72
LIMD2-207ENST00000579329 ZNF461Q8TAF7 563 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 ZNF707Q96C28 371 aaPredicted RBP25.82■■□□□ 1.72
LIMD2-207ENST00000579329 FNBP1Q96RU3 617 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 PRKD2Q9BZL6 878 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 DSEQ9UL01 958 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 AGAP1Q9UPQ3 857 aa25.82■■□□□ 1.72
LIMD2-207ENST00000579329 WDR27A2RRH5 827 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 CALUO43852 315 aaPredicted RBP25.81■■□□□ 1.72
LIMD2-207ENST00000579329 KINO60870 393 aaKnown RBP25.81■■□□□ 1.72
LIMD2-207ENST00000579329 PRPF40AO75400 957 aaKnown RBP25.81■■□□□ 1.72
LIMD2-207ENST00000579329 SMC2O95347 1197 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 HOXA9P31269 272 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 UVSSAQ2YD98 709 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 OVOS1Q6IE37 1185 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 CCDC149Q6ZUS6 474 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 RTL10Q7L3V2 364 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 SLC9A9Q8IVB4 645 aa25.81■■□□□ 1.72
LIMD2-207ENST00000579329 GUF1Q8N442 669 aaKnown RBP25.81■■□□□ 1.72
LIMD2-207ENST00000579329 CSGALNACT2Q8N6G5 542 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms