RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 URODP06132 367 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 FGFR3P22607 806 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 CA8P35219 290 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 GLUD2P49448 558 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 AARSP49588 968 aaKnown RBP eCLIP16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 DSG1Q02413 1049 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 NCOA4Q13772 614 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 CAMK1Q14012 370 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 SGSM1Q2NKQ1 1148 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 KIAA0319Q5VV43 1072 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 PLPP4Q5VZY2 271 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 PDXDC1Q6P996 788 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 C15orf39Q6ZRI6 1047 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 GPR65Q8IYL9 337 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 MRPL43Q8N983 215 aaKnown RBP16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 APPL2Q8NEU8 664 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 MYLIPQ8WY64 445 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 SENP8Q96LD8 212 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 SAMSN1Q9NSI8 373 aaKnown RBP16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 FANCLQ9NW38 375 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 BECN2A8MW95 431 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 KCNJ18B7U540 433 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 CYB561D2O14569 222 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 SPTLC1O15269 473 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 CSPG5O95196 566 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 VNN1O95497 513 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 EEF1GP26641 437 aaKnown RBP16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 IRS1P35568 1242 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 PIK3CAP42336 1068 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 MXI1P50539 228 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 MYL6P60660 151 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 CETN1Q12798 172 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 KCNH2Q12809 1159 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 KCNJ12Q14500 433 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 SCARA3Q6AZY7 606 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 METTL23Q86XA0 190 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 CCDC150Q8NCX0 1101 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 TAF4BQ92750 862 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 PPP2R3CQ969Q6 453 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 GUCD1Q96NT3 240 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 GDAP2Q9NXN4 497 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 DSEQ9UL01 958 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 MTCH2Q9Y6C9 303 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 TRIP11Q15643 1979 aa16.74■□□□□ 0.27
SLC6A4-205ENST00000579221 NLRC5Q86WI3 1866 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 KIAA1671Q9BY89 1806 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 H7C4K7 107 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 C2CD2LO14523 706 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 PMM2O15305 246 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 P4HA2O15460 535 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 HUS1O60921 280 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 CLSTN1O94985 981 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 STAU1O95793 577 aaKnown RBP16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 HLA-DRAP01903 254 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 AFPP02771 609 aaKnown RBP16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 TPM2P07951 284 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 ODC1P11926 461 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 TYMPP19971 482 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 CDK11BP21127 795 aaKnown RBP16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 TKTP29401 623 aaKnown RBP16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 FMO5P49326 533 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 CREMQ03060 361 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 HSP90AA4PQ58FG1 418 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 TCP11X2Q5H9J9 407 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 LRSAM1Q6UWE0 723 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 ANKS3Q6ZW76 656 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 DPH6Q7L8W6 267 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 FBXL13Q8NEE6 735 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 ANKRD20A12PQ8NF67 263 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 AUTS2Q8WXX7 1259 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 EMILIN2Q9BXX0 1053 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 IMPG2Q9BZV3 1241 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 NSUN3Q9H649 340 aaKnown RBP16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 RAB20Q9NX57 234 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 SNX9Q9Y5X1 595 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 IRAK3Q9Y616 596 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 ANK1P16157 1881 aa16.73■□□□□ 0.27
SLC6A4-205ENST00000579221 PDCD11Q14690 1871 aaKnown RBP16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 C2orf71A6NGG8 1288 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 LILRB3O75022 631 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 FAM163BP0C2L3 166 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 P4HA1P13674 534 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 FOSL2P15408 326 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 TNNC1P63316 161 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 YWHAHQ04917 246 aaPredicted RBP16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 NCAPHQ15003 741 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 PTPN14Q15678 1187 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 MAN2A1Q16706 1144 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 ZNF699Q32M78 642 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 WDR72Q3MJ13 1102 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 CBWD6Q4V339 395 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 ZNF667Q5HYK9 610 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 WDR44Q5JSH3 913 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 CBWD3Q5JTY5 395 aa16.72■□□□□ 0.27
SLC6A4-205ENST00000579221 RTP2Q5QGT7 225 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms