RNA–Protein interactions for RNA: ENST00000578985.5

IFT20-208, Transcript of intraflagellar transport 20, humanhuman

TSL 3 BASIC

Gene IFT20, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-208ENST00000578985 M0QZQ0 153 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 PHACTR2O75167 634 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 PNPLA4P41247 253 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 DLG4P78352 724 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 CREMQ03060 361 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 ENPEPQ07075 957 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 BFSP1Q12934 665 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 PSMD5Q16401 504 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 DPCR1Q3MIW9 517 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 SV2CQ496J9 727 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 PDXDC1Q6P996 788 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 LRRC52Q8N7C0 313 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 EFHBQ8N7U6 833 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 APPL2Q8NEU8 664 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 LNX1Q8TBB1 728 aaPredicted RBP16.59■□□□□ 0.25
IFT20-208ENST00000578985 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
IFT20-208ENST00000578985 BORCS6Q96GS4 357 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 SENP8Q96LD8 212 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 FNIP2Q9P278 1114 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 DACH1Q9UI36 760 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 PLXNA3P51805 1871 aa16.59■□□□□ 0.25
IFT20-208ENST00000578985 ARHGEF37A1IGU5 675 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 FSD2A1L4K1 749 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 IKBKBO14920 756 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 C4BPAP04003 597 aaKnown RBP16.58■□□□□ 0.24
IFT20-208ENST00000578985 RPL17P18621 184 aaKnown RBP16.58■□□□□ 0.24
IFT20-208ENST00000578985 KLRC2P26717 231 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 ADAM15Q13444 863 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 BIRC3Q13489 604 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 COL19A1Q14993 1142 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 VARS2Q5ST30 1063 aaKnown RBP16.58■□□□□ 0.24
IFT20-208ENST00000578985 C1orf220Q5T0J3 134 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 CAVIN1Q6NZI2 390 aaKnown RBP16.58■□□□□ 0.24
IFT20-208ENST00000578985 SASS6Q6UVJ0 657 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 ANKS3Q6ZW76 656 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 FILIP1Q7Z7B0 1213 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 PABPC5Q96DU9 382 aaKnown RBP16.58■□□□□ 0.24
IFT20-208ENST00000578985 HPDLQ96IR7 371 aa16.58■□□□□ 0.24
IFT20-208ENST00000578985 MTCL1Q9Y4B5 1905 aaKnown RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 KPNA7A9QM74 516 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 H7C4K7 107 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 CYB561D2O14569 222 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TEX28O15482 410 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 LINC01565O15544 149 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 FGFR1OPO95684 399 aaKnown RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 ADH1AP07327 375 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TRIM49P0CI25 452 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TRIM49CP0CI26 452 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 ODC1P11926 461 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TYMPP19971 482 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 NDUFV1P49821 464 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 MCCD1P59942 119 aaPredicted RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 MYO1EQ12965 1108 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TRPC3Q13507 836 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 CTC1Q2NKJ3 1217 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 KLHL40Q2TBA0 621 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TDRD10Q5VZ19 366 aaKnown RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 LLGL2Q6P1M3 1020 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 EP400NLQ6ZTU2 488 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 PPFIBP1Q86W92 1011 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 SLC22A17Q8WUG5 538 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 MED15Q96RN5 788 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 SRRTQ9BXP5 876 aaKnown RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 PRDM6Q9NQX0 595 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 CLDND1Q9NY35 253 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 MTRRQ9UBK8 725 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 ARMCX3Q9UH62 379 aaPredicted RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 TIMM13Q9Y5L4 95 aaPredicted RBP16.57■□□□□ 0.24
IFT20-208ENST00000578985 BACE2Q9Y5Z0 518 aa16.57■□□□□ 0.24
IFT20-208ENST00000578985 TSC2P49815 1807 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 SPTBN5Q9NRC6 3674 aaKnown RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 CST3P01034 146 aaPredicted RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 ERCC5P28715 1186 aaPredicted RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 GCLMP48507 274 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 MRPL58Q14197 206 aaKnown RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 ZACNQ401N2 412 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 CTXN3Q4LDR2 81 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 CT47A1Q5JQC4 288 aaPredicted RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 SV2AQ7L0J3 742 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 FRMD5Q7Z6J6 570 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 GLYCTKQ8IVS8 523 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 VN1R2Q8NFZ6 395 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 HLA-CQ95604 372 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 CLSTN3Q9BQT9 956 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 UBE2ZQ9H832 354 aaPredicted RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 METTL14Q9HCE5 456 aaKnown RBP16.56■□□□□ 0.24
IFT20-208ENST00000578985 ANO10Q9NW15 660 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 COG5Q9UP83 839 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 PRUNE2Q8WUY3 3088 aa16.56■□□□□ 0.24
IFT20-208ENST00000578985 TRANK1O15050 2925 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.55■□□□□ 0.24
IFT20-208ENST00000578985 ADAM12O43184 909 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 STX10O60499 249 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 OAZ2O95190 189 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 VNN1O95497 513 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 GNA14O95837 355 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 GLP2RO95838 553 aa16.55■□□□□ 0.24
IFT20-208ENST00000578985 SRGAP2BP0DMP2 458 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms