RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TRIM21P19474 475 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DNAJB2P25686 324 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SLC11A1P49279 550 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GUCY2FP51841 1108 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 UBASH3AP57075 661 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FANCCQ00597 558 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 UBXN1Q04323 297 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 EXOC3L4Q17RC7 722 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CBWD6Q4V339 395 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ZNF667Q5HYK9 610 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CBWD3Q5JTY5 395 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CBWD5Q5RIA9 395 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C1orf220Q5T0J3 134 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C15orf39Q6ZRI6 1047 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TIFAQ96CG3 184 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FAXDC2Q96IV6 333 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PCMTD1Q96MG8 357 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NT5C1BQ96P26 610 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NKX2-4Q9H2Z4 354 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GCNT4Q9P109 453 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DSEQ9UL01 958 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SSX2IPQ9Y2D8 614 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 COQ4Q9Y3A0 265 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DAAM1Q9Y4D1 1078 aa12.12□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LCHNA4D1U4 455 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LGALS16A8MUM7 142 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LPXNO60711 386 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 KIF4AO95239 1232 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TBXAS1P24557 533 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 BMPR1AP36894 532 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LILRA4P59901 499 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ERVK-21P61565 698 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 YWHAEP62258 255 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PLCB3Q01970 1234 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 UBE3AQ05086 875 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MIIPQ5JXC2 388 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 METTL23Q86XA0 190 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SLC39A11Q8N1S5 342 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TTC39CQ8N584 583 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 EHBP1Q8NDI1 1231 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 APPL2Q8NEU8 664 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TAS1R2Q8TE23 839 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FAM124BQ9H5Z6 455 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 VRTNQ9H8Y1 702 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SIX4Q9UIU6 781 aa12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MTCL1Q9Y4B5 1905 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP3-210ENST00000578733 A0A1B0GTH6 734 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FSD2A1L4K1 749 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GOLGA6L3A6NEY3 463 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NT5C1B-RDH14C9J2C7 533 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 C5orf67F2Z3F1 127 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SYN3O14994 580 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FGF18O76093 207 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ASS1P00966 412 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CST3P01034 146 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MYOGP15173 224 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RFX1P22670 979 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PLA2G5P39877 138 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PBX2P40425 430 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 MYL6P60660 151 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 NOP14P78316 857 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CREMQ03060 361 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TAP1Q03518 808 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 USP41Q3LFD5 358 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 WDR72Q3MJ13 1102 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 EPC2Q52LR7 807 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 KIAA1841Q6NSI8 718 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FUT10Q6P4F1 479 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 DPH6Q7L8W6 267 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TMEM86AQ8N2M4 240 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 TOP6BLQ8N6T0 577 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FBXO22Q8NEZ5 403 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SPATA18Q8TC71 538 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PAAF1Q9BRP4 392 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 INTS2Q9H0H0 1204 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 RTN4Q9NQC3 1192 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 GDAP2Q9NXN4 497 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PCDHB8Q9UN66 801 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 LZTS1Q9Y250 596 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 YBX2Q9Y2T7 364 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SNX9Q9Y5X1 595 aa12.1□□□□□ -0.47
CDK5RAP3-210ENST00000578733 ATG2AQ2TAZ0 1938 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 CYB561D2O14569 222 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 B4GALT3O60512 393 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 VNN1O95497 513 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SOD2P04179 222 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 URODP06132 367 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 PBX3P40426 434 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 AARSP49588 968 aaKnown RBP eCLIP12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
CDK5RAP3-210ENST00000578733 SARM1Q6SZW1 724 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms