RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 KSR1Q8IVT5 923 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 TRIM22Q8IYM9 498 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 ZNF713Q8N859 430 aaPredicted RBP6.91□□□□□ -1.3
UBB-208ENST00000578706 GSTCDQ8NEC7 633 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 CRYGNQ8WXF5 182 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 USP28Q96RU2 1077 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 CEP89Q96ST8 783 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 GAD1Q99259 594 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 JPH2Q9BR39 696 aaPredicted RBP6.91□□□□□ -1.3
UBB-208ENST00000578706 PAAF1Q9BRP4 392 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 TNMDQ9H2S6 317 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 AGPAT5Q9NUQ2 364 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 BARHL2Q9NY43 387 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 SEPT9Q9UHD8 586 aaPredicted RBP6.91□□□□□ -1.3
UBB-208ENST00000578706 ADAM28Q9UKQ2 775 aa6.91□□□□□ -1.3
UBB-208ENST00000578706 DOPEY1Q5JWR5 2465 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 TSC2P49815 1807 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 IGKV6-21A0A0C4DH24 114 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 ARL5CA6NH57 179 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 ESPNB1AK53 854 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 CHMP2AO43633 222 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 GAS7O60861 476 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 MAFO75444 373 aaPredicted RBP6.9□□□□□ -1.3
UBB-208ENST00000578706 DEXIO95424 95 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 CDC27P30260 824 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 HOXA11P31270 313 aaPredicted RBP6.9□□□□□ -1.3
UBB-208ENST00000578706 ME1P48163 572 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 JAK3P52333 1124 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 GUCY1B3Q02153 619 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 FAM160A1Q05DH4 1040 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 STK38Q15208 465 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 SAFBQ15424 915 aaKnown RBP eCLIP6.9□□□□□ -1.3
UBB-208ENST00000578706 PSMD5Q16401 504 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 UGCGQ16739 394 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 PMS2CLQ68D20 193 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 ADALQ6DHV7 355 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 LINC00301Q8NCQ3 95 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 RNF214Q8ND24 703 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 TTC8Q8TAM2 541 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 DEPDC1BQ8WUY9 529 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 SMARCD2Q92925 531 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 CHFRQ96EP1 664 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 LRRC3BQ96PB8 259 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 RIT2Q99578 217 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 SH2D3AQ9BRG2 576 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 SLC32A1Q9H598 525 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 CLMPQ9H6B4 373 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 IFT122Q9HBG6 1241 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 RBM28Q9NW13 759 aaKnown RBP6.9□□□□□ -1.3
UBB-208ENST00000578706 DKK4Q9UBT3 224 aa6.9□□□□□ -1.3
UBB-208ENST00000578706 GOLGA4Q13439 2230 aaKnown RBP6.9□□□□□ -1.3
UBB-208ENST00000578706 NOTCH2Q04721 2471 aa6.9□□□□□ -1.31
UBB-208ENST00000578706 ABCA12Q86UK0 2595 aa6.9□□□□□ -1.31
UBB-208ENST00000578706 NUP210Q8TEM1 1887 aaPredicted RBP6.9□□□□□ -1.31
UBB-208ENST00000578706 RELNP78509 3460 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 TMEM150BA6NC51 233 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 HEPACAM2A8MVW5 462 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 UPK3BL1B0FP48 263 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 UPK3BL2E5RIL1 263 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 ZNF263O14978 683 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SPTLC2O15270 562 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 ABCB7O75027 752 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SRGAP2CP0DJJ0 459 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 BCKDHBP21953 392 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 IGFBP6P24592 240 aaPredicted RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 U2AF2P26368 475 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBB-208ENST00000578706 CIITAP33076 1130 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 MAPK8P45983 427 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 TYRO3Q06418 890 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 GNL2Q13823 731 aaKnown RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 RAB33AQ14088 237 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SF3A1Q15459 793 aaKnown RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 ELF2Q15723 593 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 ZNF423Q2M1K9 1284 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SASS6Q6UVJ0 657 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SRGAP1Q7Z6B7 1085 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 MFSD6LQ8IWD5 586 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 EXOC8Q8IYI6 725 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 HACE1Q8IYU2 909 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 REXO1Q8N1G1 1221 aaKnown RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 SYNPOQ8N3V7 929 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 PNPLA1Q8N8W4 532 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 ADAMTS14Q8WXS8 1223 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SLC7A3Q8WY07 619 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 MSANTD3Q96H12 275 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SLC26A6Q9BXS9 759 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 RNF26Q9BY78 433 aaPredicted RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 PRORYQ9H606 182 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 MINDY3Q9H8M7 445 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 TRPV4Q9HBA0 871 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 C6orf50Q9HD87 102 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 SNTG2Q9NY99 539 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 GTSE1Q9NYZ3 720 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 CCDC39Q9UFE4 941 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 MBD1Q9UIS9 605 aaPredicted RBP6.89□□□□□ -1.31
UBB-208ENST00000578706 INVSQ9Y283 1065 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 HES2Q9Y543 173 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 IPPQ9Y573 584 aa6.89□□□□□ -1.31
UBB-208ENST00000578706 COL4A3BPQ9Y5P4 624 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms