RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 PTPN14Q15678 1187 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 ARMCX5Q6P1M9 558 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 CATSPER4Q7RTX7 472 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 HAUS6Q7Z4H7 955 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 RHPN2Q8IUC4 686 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 URGCPQ8TCY9 931 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 CPLX3Q8WVH0 158 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 SPIRE2Q8WWL2 714 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 EEF2KMTQ96G04 330 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 NLRP4Q96MN2 994 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
SS18-210ENST00000578700 FGFBP2Q9BYJ0 223 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 ST6GALNAC4Q9H4F1 302 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 KMT5AQ9NQR1 393 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 CHST12Q9NRB3 414 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 FAM105AQ9NUU6 356 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.01□□□□□ -0.65
SS18-210ENST00000578700 LUC7L2Q9Y383 392 aaKnown RBP11.01□□□□□ -0.65
SS18-210ENST00000578700 IRAK3Q9Y616 596 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 FANCMQ8IYD8 2048 aa11.01□□□□□ -0.65
SS18-210ENST00000578700 EPG5Q9HCE0 2579 aa11□□□□□ -0.65
SS18-210ENST00000578700 KRBA1A5PL33 1030 aa11□□□□□ -0.65
SS18-210ENST00000578700 ARHGAP6O43182 974 aa11□□□□□ -0.65
SS18-210ENST00000578700 ZSCAN12O43309 604 aa11□□□□□ -0.65
SS18-210ENST00000578700 MFAP3LO75121 409 aa11□□□□□ -0.65
SS18-210ENST00000578700 DDHD2O94830 711 aa11□□□□□ -0.65
SS18-210ENST00000578700 POMCP01189 267 aa11□□□□□ -0.65
SS18-210ENST00000578700 SPATA31D3P0C874 917 aa11□□□□□ -0.65
SS18-210ENST00000578700 CASP14P31944 242 aa11□□□□□ -0.65
SS18-210ENST00000578700 MAPK7Q13164 816 aa11□□□□□ -0.65
SS18-210ENST00000578700 ARID5BQ14865 1188 aa11□□□□□ -0.65
SS18-210ENST00000578700 NFIL3Q16649 462 aa11□□□□□ -0.65
SS18-210ENST00000578700 ZC2HC1CQ53FD0 456 aaPredicted RBP11□□□□□ -0.65
SS18-210ENST00000578700 CEP135Q66GS9 1140 aa11□□□□□ -0.65
SS18-210ENST00000578700 SPATA31D4Q6ZUB0 917 aa11□□□□□ -0.65
SS18-210ENST00000578700 KSR1Q8IVT5 923 aa11□□□□□ -0.65
SS18-210ENST00000578700 ZC3H3Q8IXZ2 948 aaKnown RBP11□□□□□ -0.65
SS18-210ENST00000578700 DAW1Q8N136 415 aa11□□□□□ -0.65
SS18-210ENST00000578700 NEK11Q8NG66 645 aa11□□□□□ -0.65
SS18-210ENST00000578700 PGBD4Q96DM1 585 aa11□□□□□ -0.65
SS18-210ENST00000578700 ERGIC2Q96RQ1 377 aa11□□□□□ -0.65
SS18-210ENST00000578700 MKNK1Q9BUB5 465 aa11□□□□□ -0.65
SS18-210ENST00000578700 VN1R3Q9BXE9 311 aa11□□□□□ -0.65
SS18-210ENST00000578700 NIFKQ9BYG3 293 aaKnown RBP11□□□□□ -0.65
SS18-210ENST00000578700 INO80BQ9C086 356 aaPredicted RBP11□□□□□ -0.65
SS18-210ENST00000578700 POLD4Q9HCU8 107 aa11□□□□□ -0.65
SS18-210ENST00000578700 MAN1C1Q9NR34 630 aa11□□□□□ -0.65
SS18-210ENST00000578700 MRPL17Q9NRX2 175 aaKnown RBP11□□□□□ -0.65
SS18-210ENST00000578700 IGSF9Q9P2J2 1179 aa11□□□□□ -0.65
SS18-210ENST00000578700 SUCLA2Q9P2R7 463 aaPredicted RBP11□□□□□ -0.65
SS18-210ENST00000578700 PYCARDQ9ULZ3 195 aa11□□□□□ -0.65
SS18-210ENST00000578700 CACNA1BQ00975 2339 aa11□□□□□ -0.65
SS18-210ENST00000578700 OTOGLQ3ZCN5 2332 aa11□□□□□ -0.65
SS18-210ENST00000578700 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 NRP1O14786 923 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 INPPL1O15357 1258 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 GAS2O43903 313 aaKnown RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 B4GALT3O60512 393 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 EXOC3O60645 756 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 N4BP1O75113 896 aaKnown RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 KRT13P13646 458 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 AFF1P51825 1210 aaKnown RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 NCKAP1LP55160 1127 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 ADKP55263 362 aaKnown RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 CCZ1BP86790 482 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 CCZ1P86791 482 aaPredicted RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 GTF2BQ00403 316 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 CDC42EP1Q00587 391 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 STRN3Q13033 797 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 EMC2Q15006 297 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 SYCP1Q15431 976 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 FIGNQ5HY92 759 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 TAS1R1Q7RTX1 841 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 USP37Q86T82 979 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 FAM186BQ8IYM0 893 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 SLC44A3Q8N4M1 653 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 DCLK2Q8N568 766 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 TCP11Q8WWU5 503 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 POLR3FQ9H1D9 316 aaPredicted RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 MMRN2Q9H8L6 949 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 TBC1D17Q9HA65 648 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 PIDD1Q9HB75 910 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 RRAGDQ9NQL2 400 aaPredicted RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 AGPAT3Q9NRZ7 376 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 WNT16Q9UBV4 365 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 PRG3Q9Y2Y8 225 aaPredicted RBP10.99□□□□□ -0.65
SS18-210ENST00000578700 PCDHB2Q9Y5E7 798 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 PHLPP2Q6ZVD8 1323 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 DOCK8Q8NF50 2099 aa10.99□□□□□ -0.65
SS18-210ENST00000578700 TPRP12270 2363 aaKnown RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 MTCL1Q9Y4B5 1905 aaKnown RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 A0A1W2PQJ5 194 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 GOLGA6L9A6NEM1 432 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 KIF2AO00139 706 aaPredicted RBP10.98□□□□□ -0.65
SS18-210ENST00000578700 CLIC2O15247 247 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 SLC16A4O15374 487 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 RFPL2O75678 378 aa10.98□□□□□ -0.65
SS18-210ENST00000578700 AFPP02771 609 aaKnown RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms