RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 SPRED2Q7Z698 418 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 RBM23Q86U06 439 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 WDR49Q8IV35 697 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 ADHFE1Q8IWW8 467 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 LEMD2Q8NC56 503 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 ZNF461Q8TAF7 563 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 SPATA20Q8TB22 786 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 LNX1Q8TBB1 728 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 SLC22A17Q8WUG5 538 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 SCFD1Q8WVM8 642 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 CEP295NLQ96MC4 621 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 GBP4Q96PP9 640 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 FAM213AQ9BRX8 229 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 GPR62Q9BZJ7 368 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 AGPAT3Q9NRZ7 376 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 MARCH5Q9NX47 278 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 RBAKQ9NYW8 714 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 MTRRQ9UBK8 725 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 ZMYM5Q9UJ78 669 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 TSR3Q9UJK0 312 aaKnown RBP9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 TET1Q8NFU7 2136 aa9.28□□□□□ -0.92
PPP4R1-210ENST00000578557 CASTOR2A6NHX0 329 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 HIDE1A8MVS5 230 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 ANKRD63C9JTQ0 380 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 TEX28O15482 410 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MBTPS2O43462 519 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 KLRC4O43908 158 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 EXOC3O60645 756 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MICAL2O94851 1124 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 PRPF6O94906 941 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 FGFR1OPO95684 399 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 FGF19O95750 216 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 STAU1O95793 577 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 CYP11A1P05108 521 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MYBP10242 640 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 HARSP12081 509 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MCM4P33991 863 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 CA8P35219 290 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 LTBRP36941 435 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 PBX3P40426 434 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 LHX1P48742 406 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 ACOT2P49753 483 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 TAF6P49848 677 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 LILRA4P59901 499 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MCCD1P59942 119 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 YWHAHQ04917 246 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 PLD1Q13393 1074 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MAPRE1Q15691 268 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 PSMD5Q16401 504 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 LIN9Q5TKA1 542 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 SLC39A4Q6P5W5 647 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 DSTYKQ6XUX3 929 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 CEP120Q8N960 986 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 TRIML1Q8N9V2 468 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 ENGASEQ8NFI3 743 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 RIN2Q8WYP3 895 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 SUSD6Q92537 303 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 TAF4BQ92750 862 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 SMARCE1Q969G3 411 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 ACSF2Q96CM8 615 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 ZMAT2Q96NC0 199 aaKnown RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 UHRF1Q96T88 793 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 MKNK1Q9BUB5 465 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 S1PR5Q9H228 398 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 SLC39A2Q9NP94 309 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 DMAC2Q9NW81 257 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 GDAP2Q9NXN4 497 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 DPP3Q9NY33 737 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 HSPBP1Q9NZL4 362 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 CLEC1BQ9P126 229 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 ASB3Q9Y575 518 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 DOCK5Q9H7D0 1870 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 SCN5AQ14524 2016 aa9.27□□□□□ -0.93
PPP4R1-210ENST00000578557 CHD9Q3L8U1 2897 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 KPNA7A9QM74 516 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 TNFRSF10AO00220 468 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 PER2O15055 1255 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 TGFB1I1O43294 461 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 ABLIM3O94929 683 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 TMEM191BP0C7N4 346 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 P4HA1P13674 534 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 ATF2P15336 505 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 GTF2H1P32780 548 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 TUFMP49411 452 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 CLDN10P78369 228 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 LRRC63Q05C16 580 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 SNW1Q13573 536 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 CBX2Q14781 532 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 PSMD6Q15008 389 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 SNRNP35Q16560 246 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 ZNF658Q5TYW1 1059 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 C9orf57Q5W0N0 161 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 JADE1Q6IE81 842 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 CRELD2Q6UXH1 353 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 INTS8Q75QN2 995 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 OTOP3Q7RTS5 596 aa9.26□□□□□ -0.93
PPP4R1-210ENST00000578557 ADGRD2Q7Z7M1 963 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms