RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 GBP1P32455 592 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 EPHB4P54760 987 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 RWDD2BP57060 319 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 OSTNP61366 133 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 VSNL1P62760 191 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 FAM193AP78312 1265 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 NNTQ13423 1086 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 STILQ15468 1287 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 AMHR2Q16671 573 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 MARCH8Q5T0T0 291 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 SPOPLQ6IQ16 392 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 TAF2Q6P1X5 1199 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 EMBQ6PCB8 327 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 BEST2Q8NFU1 509 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 OLIG1Q8TAK6 271 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 ZNF606Q8WXB4 792 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 MTG1Q9BT17 334 aaPredicted RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 MINDY3Q9H8M7 445 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 APOBEC3GQ9HC16 384 aaKnown RBP11.86□□□□□ -0.51
SKA2-204ENST00000578519 CISHQ9NSE2 258 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 WDR35Q9P2L0 1181 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 RASAL2Q9UJF2 1139 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 GJD2Q9UKL4 321 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 PCDHGC3Q9UN70 934 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 L1RE1Q9UN81 338 aa11.86□□□□□ -0.51
SKA2-204ENST00000578519 TMEM88BA6NKF7 163 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 TMEM110-MUSTN1A8MSY1 372 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 TLR3O15455 904 aaKnown RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 CD4P01730 458 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 GJB1P08034 283 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 CXCL8P10145 99 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 DARSP14868 501 aaKnown RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 DESP17661 470 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 CYP2C19P33261 490 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 TNNT3P45378 269 aaPredicted RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 ZNF132P52740 706 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 CRYBB1P53674 252 aaPredicted RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 CUL1Q13616 776 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 FSCN1Q16658 493 aaKnown RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 PRAMEF19Q5SWL8 479 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 NAA35Q5VZE5 725 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 JADE1Q6IE81 842 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 CPB2Q96IY4 423 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 MS4A14Q96JA4 679 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 ZNF668Q96K58 619 aaPredicted RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 PNKPQ96T60 521 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 ZSWIM1Q9BR11 485 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 LRRC1Q9BTT6 524 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 FAM49AQ9H0Q0 323 aaPredicted RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 RAB17Q9H0T7 212 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 EPC1Q9H2F5 836 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 ADAMTS10Q9H324 1103 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 HOMER3Q9NSC5 361 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 RBM12Q9NTZ6 932 aaKnown RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.85□□□□□ -0.51
SKA2-204ENST00000578519 IP6K2Q9UHH9 426 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 FEZ2Q9UHY8 353 aaPredicted RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 TMEM59LQ9UK28 342 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 PACSIN2Q9UNF0 486 aaPredicted RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 NOC2LQ9Y3T9 749 aaKnown RBP11.85□□□□□ -0.51
SKA2-204ENST00000578519 PCDHA3Q9Y5H8 950 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
SKA2-204ENST00000578519 FAM187AA6NFU0 413 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 TTLL13PA6NNM8 815 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 DDX3YO15523 660 aaKnown RBP11.84□□□□□ -0.51
SKA2-204ENST00000578519 VDRP11473 427 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 COMTP21964 271 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 MAN1A1P33908 653 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 WNT7BP56706 349 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 NOMO3P69849 1222 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 NOGQ13253 232 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 DHX34Q14147 1143 aaKnown RBP11.84□□□□□ -0.51
SKA2-204ENST00000578519 ARHGEF6Q15052 776 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 WDR72Q3MJ13 1102 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 ODF2Q5BJF6 829 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 PAXIP1Q6ZW49 1069 aaPredicted RBP11.84□□□□□ -0.51
SKA2-204ENST00000578519 ERICH1Q86X53 443 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 PALB2Q86YC2 1186 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 EFCAB13Q8IY85 973 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 UBR7Q8N806 425 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 FEZF2Q8TBJ5 459 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 CYFIP2Q96F07 1278 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 RNPC3Q96LT9 517 aaKnown RBP11.84□□□□□ -0.51
SKA2-204ENST00000578519 KRT12Q99456 494 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 BCO2Q9BYV7 579 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 LHX5Q9H2C1 402 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 FAM114A2Q9NRY5 505 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 DPP3Q9NY33 737 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 NXF1Q9UBU9 619 aaKnown RBP11.84□□□□□ -0.51
SKA2-204ENST00000578519 ANAPC7Q9UJX3 599 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 AGAP1Q9UPQ3 857 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 UTP11Q9Y3A2 253 aaKnown RBP11.84□□□□□ -0.51
SKA2-204ENST00000578519 TRPM7Q96QT4 1865 aa11.84□□□□□ -0.51
SKA2-204ENST00000578519 MAP2K7O14733 419 aa11.83□□□□□ -0.52
SKA2-204ENST00000578519 GPR32O75388 356 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms