RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TYMPP19971 482 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 ELF1P32519 619 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 ARPP19P56211 112 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 NTHL1P78549 312 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 YWHAHQ04917 246 aaPredicted RBP24.88■■□□□ 1.57
VAPA-205ENST00000578314 STXBP4Q6ZWJ1 553 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 GET4Q7L5D6 327 aaPredicted RBP24.88■■□□□ 1.57
VAPA-205ENST00000578314 NT5DC4Q86YG4 428 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 HPS3Q969F9 1004 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 DNMT3BQ9UBC3 853 aaKnown RBP24.88■■□□□ 1.57
VAPA-205ENST00000578314 AFF4Q9UHB7 1163 aaKnown RBP24.88■■□□□ 1.57
VAPA-205ENST00000578314 POLIQ9UNA4 740 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 TIMM13Q9Y5L4 95 aaPredicted RBP24.88■■□□□ 1.57
VAPA-205ENST00000578314 MYH15Q9Y2K3 1946 aa24.88■■□□□ 1.57
VAPA-205ENST00000578314 PDCD11Q14690 1871 aaKnown RBP24.87■■□□□ 1.57
VAPA-205ENST00000578314 KMT2EQ8IZD2 1858 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 SPTLC1O15269 473 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 SEC24AO95486 1093 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 ASIC1P78348 528 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 GLIS3Q8NEA6 775 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 ZSWIM2Q8NEG5 633 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 SAAL1Q96ER3 474 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 PYM1Q9BRP8 204 aaKnown RBP24.87■■□□□ 1.57
VAPA-205ENST00000578314 CBWD1Q9BRT8 395 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 DPP3Q9NY33 737 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 KCNH3Q9ULD8 1083 aa24.87■■□□□ 1.57
VAPA-205ENST00000578314 MYO10Q9HD67 2058 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 ANHXE9PGG2 379 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 EHHADHQ08426 723 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 IER5LQ5T953 404 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 EPM2AIP1Q7L775 607 aaPredicted RBP24.86■■□□□ 1.57
VAPA-205ENST00000578314 USP37Q86T82 979 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 BRSK2Q8IWQ3 736 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 EFCAB13Q8IY85 973 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 ZNF507Q8TCN5 953 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 SENP8Q96LD8 212 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 CYP4F11Q9HBI6 524 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 CDH7Q9ULB5 785 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 DUSP12Q9UNI6 340 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 ZDBF2Q9HCK1 2354 aa24.86■■□□□ 1.57
VAPA-205ENST00000578314 PIEZO1Q92508 2521 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 OR6C75A6NL08 312 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 PRRG1O14668 218 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 KIAA0391O15091 583 aaKnown RBP24.85■■□□□ 1.57
VAPA-205ENST00000578314 EIF3DO15371 548 aaKnown RBP eCLIP24.85■■□□□ 1.57
VAPA-205ENST00000578314 EXTL3O43909 919 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 HOXD13P35453 343 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 PABPC1LQ4VXU2 614 aaKnown RBP24.85■■□□□ 1.57
VAPA-205ENST00000578314 UNC13DQ70J99 1090 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 PRSS33Q8NF86 280 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 RSAD2Q8WXG1 361 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 AVENQ9NQS1 362 aaPredicted RBP24.85■■□□□ 1.57
VAPA-205ENST00000578314 HCFC1R1Q9NWW0 138 aa24.85■■□□□ 1.57
VAPA-205ENST00000578314 PVALEFA0A1B0GWK0 134 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 LRG1P02750 347 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 CYP11A1P05108 521 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 WNT7BP56706 349 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 ADCY1Q08828 1119 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 FAM26FQ5R3K3 315 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 OVOS1Q6IE37 1185 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 SLC44A3Q8N4M1 653 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 ITFG1Q8TB96 612 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 LEO1Q8WVC0 666 aaPredicted RBP24.84■■□□□ 1.57
VAPA-205ENST00000578314 FGF13Q92913 245 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 PRRX2Q99811 253 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 PCIF1Q9H4Z3 704 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 RBAKQ9NYW8 714 aaPredicted RBP24.84■■□□□ 1.57
VAPA-205ENST00000578314 INSL5Q9Y5Q6 135 aa24.84■■□□□ 1.57
VAPA-205ENST00000578314 PDGFBP01127 241 aaPredicted RBP24.83■■□□□ 1.57
VAPA-205ENST00000578314 SLFN14P0C7P3 912 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 ODC1P11926 461 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 CPB1P15086 417 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 PTPN2P17706 415 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 CMA1P23946 247 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 TAF6P49848 677 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 VCPP55072 806 aaKnown RBP24.83■■□□□ 1.57
VAPA-205ENST00000578314 KRT85P78386 507 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 GPR17Q13304 367 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 HTR4Q13639 388 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 MYBPC2Q14324 1141 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 ARMCX5Q6P1M9 558 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 RNF19BQ6ZMZ0 732 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 ALYREFQ86V81 257 aaKnown RBP24.83■■□□□ 1.57
VAPA-205ENST00000578314 BORCS6Q96GS4 357 aa24.83■■□□□ 1.57
VAPA-205ENST00000578314 GOLGA8IPA6NC78 632 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 GOLGA8JA6NMD2 632 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 RHOP08100 348 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 CASP1P29466 404 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 GPD1LQ8N335 351 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 CACTINQ8WUQ7 758 aaKnown RBP24.82■■□□□ 1.56
VAPA-205ENST00000578314 SPATA32Q96LK8 384 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 BLZF1Q9H2G9 400 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 DSEQ9UL01 958 aa24.82■■□□□ 1.56
VAPA-205ENST00000578314 VNN2O95498 520 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 AVPR2P30518 371 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 AFMP43652 599 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 TFAMQ00059 246 aaKnown RBP24.81■■□□□ 1.56
VAPA-205ENST00000578314 CUL4BQ13620 913 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 CEP57L1Q8IYX8 460 aa24.81■■□□□ 1.56
VAPA-205ENST00000578314 CHAMP1Q96JM3 812 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms