RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 ZNF667Q5HYK9 610 aa29.53■■■□□ 2.32
LIMD2-203ENST00000578067 LIN9Q5TKA1 542 aa29.53■■■□□ 2.32
LIMD2-203ENST00000578067 SCARA5Q6ZMJ2 495 aa29.53■■■□□ 2.32
LIMD2-203ENST00000578067 PHF13Q86YI8 300 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-203ENST00000578067 PPP1R13LQ8WUF5 828 aa29.53■■■□□ 2.32
LIMD2-203ENST00000578067 NAP1L3Q99457 506 aaPredicted RBP29.53■■■□□ 2.32
LIMD2-203ENST00000578067 GINS2Q9Y248 185 aa29.53■■■□□ 2.32
LIMD2-203ENST00000578067 HEXIM1O94992 359 aaKnown RBP29.52■■■□□ 2.32
LIMD2-203ENST00000578067 IFT20Q8IY31 132 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 KRT35Q92764 455 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 NXF1Q9UBU9 619 aaKnown RBP29.52■■■□□ 2.32
LIMD2-203ENST00000578067 MROH7Q68CQ1 1323 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 SPOPO43791 374 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 ITGB3P05106 788 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 GLI1P08151 1106 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 SSTR3P32745 418 aaPredicted RBP29.52■■■□□ 2.32
LIMD2-203ENST00000578067 GRM5P41594 1212 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 PEX5P50542 639 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 DCAF4L1Q3SXM0 396 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 GSPT2Q8IYD1 628 aaKnown RBP29.52■■■□□ 2.32
LIMD2-203ENST00000578067 ADAM22Q9P0K1 906 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 ANAPC7Q9UJX3 599 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 POLIQ9UNA4 740 aa29.52■■■□□ 2.32
LIMD2-203ENST00000578067 MGAMO43451 1857 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 ADAM17P78536 824 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 BEX3Q00994 111 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 ZNF211Q13398 564 aaPredicted RBP29.51■■■□□ 2.31
LIMD2-203ENST00000578067 TMEM132DQ14C87 1099 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 RUFY4Q6ZNE9 571 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 APBB1IPQ7Z5R6 666 aaPredicted RBP29.51■■■□□ 2.31
LIMD2-203ENST00000578067 CXorf38Q8TB03 319 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 AENQ8WTP8 325 aaKnown RBP29.51■■■□□ 2.31
LIMD2-203ENST00000578067 BCO2Q9BYV7 579 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 GDF3Q9NR23 364 aa29.51■■■□□ 2.31
LIMD2-203ENST00000578067 CCDC66A2RUB6 948 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 RAD51CO43502 376 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 CTNNA2P26232 953 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 ATICP31939 592 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 WDR72Q3MJ13 1102 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 ZNF394Q53GI3 561 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 CATSPER4Q7RTX7 472 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 C11orf70Q9BRQ4 267 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 CDHR5Q9HBB8 845 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 ITGA4P13612 1032 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 HOXA11P31270 313 aaPredicted RBP29.5■■■□□ 2.31
LIMD2-203ENST00000578067 CTNNA1P35221 906 aaKnown RBP29.5■■■□□ 2.31
LIMD2-203ENST00000578067 TM4SF4P48230 202 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 MARCKSL1P49006 195 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 C1QBPQ07021 282 aaKnown RBP29.5■■■□□ 2.31
LIMD2-203ENST00000578067 HIC1Q14526 733 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 PCBP1Q15365 356 aaKnown RBP eCLIP29.5■■■□□ 2.31
LIMD2-203ENST00000578067 UBXN6Q9BZV1 441 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 EPB41L5Q9HCM4 733 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 C2CD2Q9Y426 696 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 PCDHA3Q9Y5H8 950 aa29.5■■■□□ 2.31
LIMD2-203ENST00000578067 A0A0U1RQG5 324 aaPredicted RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 LSM8O95777 96 aaKnown RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 BRD2P25440 801 aaKnown RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 CTGFP29279 349 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 TNNT3P45378 269 aaPredicted RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 GUCY2DQ02846 1103 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 C2CD6Q53TS8 623 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 NT5DC4Q86YG4 428 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 CD302Q8IX05 232 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 KATNAL1Q9BW62 490 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 VRTNQ9H8Y1 702 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 SART1O43290 800 aaKnown RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 DARSP14868 501 aaKnown RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 PTP4A2Q12974 167 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 SMC1AQ14683 1233 aaKnown RBP29.49■■■□□ 2.31
LIMD2-203ENST00000578067 PHLDB2Q86SQ0 1253 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 CPNE8Q86YQ8 564 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 OSMRQ99650 979 aa29.49■■■□□ 2.31
LIMD2-203ENST00000578067 CA12O43570 354 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 NPTXRO95502 500 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 AKR1A1P14550 325 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 FSCN1Q16658 493 aaKnown RBP29.48■■■□□ 2.31
LIMD2-203ENST00000578067 SLC27A1Q6PCB7 646 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 MMS22LQ6ZRQ5 1243 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 DNAJB3Q8WWF6 145 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 DDX47Q9H0S4 455 aaKnown RBP29.48■■■□□ 2.31
LIMD2-203ENST00000578067 SLITRK6Q9H5Y7 841 aa29.48■■■□□ 2.31
LIMD2-203ENST00000578067 MRPL47Q9HD33 250 aaKnown RBP29.48■■■□□ 2.31
LIMD2-203ENST00000578067 ABT1Q9ULW3 272 aaKnown RBP29.48■■■□□ 2.31
LIMD2-203ENST00000578067 DCAF8L1A6NGE4 600 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 TMEM130Q8N3G9 435 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 VIPAS39Q9H9C1 493 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 ITGA11Q9UKX5 1188 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 PCDHGC3Q9UN70 934 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 MYO1FO00160 1098 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 EPHB4P54760 987 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 LLGL2Q6P1M3 1020 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 ZNF518BQ9C0D4 1074 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 PLEKHA4Q9H4M7 779 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 SCINQ9Y6U3 715 aa29.47■■■□□ 2.31
LIMD2-203ENST00000578067 TREHO43280 583 aa29.46■■■□□ 2.31
LIMD2-203ENST00000578067 MMP8P22894 467 aa29.46■■■□□ 2.31
LIMD2-203ENST00000578067 POLR2BP30876 1174 aaKnown RBP29.46■■■□□ 2.31
LIMD2-203ENST00000578067 SLC1A1P43005 524 aa29.46■■■□□ 2.31
LIMD2-203ENST00000578067 RAP1GAPP47736 663 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms