RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 VPS52Q8N1B4 723 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 TMEM130Q8N3G9 435 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 MAFAQ8NHW3 353 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 DUSP9Q99956 384 aaKnown RBP7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 TCF25Q9BQ70 676 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 TMUB1Q9BVT8 246 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 IGFLR1Q9H665 355 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 ENTPD7Q9NQZ7 604 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 INTS13Q9NVM9 706 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 MAGEC2Q9UBF1 373 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 ADAM28Q9UKQ2 775 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 STXBP5LQ9Y2K9 1186 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 C2CD2Q9Y426 696 aa7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.23□□□□□ -1.25
PPP4R1-207ENST00000578010 PLXNA4Q9HCM2 1894 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 SYCE3A1L190 88 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 F8W810 466 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 I3L4J1 428 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 KIF4AO95239 1232 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 GNA14O95837 355 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 CST3P01034 146 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ITGB3P05106 788 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 LINC00271P0C7V0 271 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TRIM49P0CI25 452 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TRIM49CP0CI26 452 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 CCDC192P0DO97 292 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 CDK11BP21127 795 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 DNAJB1P25685 340 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ERCC5P28715 1186 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 LRPAP1P30533 357 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 POLR2BP30876 1174 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 IRS1P35568 1242 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 BRCC3P46736 316 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 GCGRP47871 477 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 GCLMP48507 274 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 AP3M2P53677 418 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ERVFC1P60507 584 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 DLG4P78352 724 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 UBE3AQ05086 875 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TYRO3Q06418 890 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ELAVL2Q12926 359 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ADGRE1Q14246 886 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 NAB2Q15742 525 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 STX1AQ16623 288 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 USP41Q3LFD5 358 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ZCWPW2Q504Y3 356 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 DCAF17Q5H9S7 520 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 CT47A1Q5JQC4 288 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 PLPP4Q5VZY2 271 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TTI2Q6NXR4 508 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 FUT10Q6P4F1 479 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TRAPPC11Q7Z392 1133 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TMEM173Q86WV6 379 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 WDR49Q8IV35 697 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 EFCAB13Q8IY85 973 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 OR5B17Q8NGF7 314 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 PARD3BQ8TEW8 1205 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 BCL7CQ8WUZ0 217 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 AUTS2Q8WXX7 1259 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 RIN2Q8WYP3 895 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ZNF516Q92618 1163 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 FAM84AQ96KN4 292 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 CEP63Q96MT8 703 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 CGRRF1Q99675 332 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 GPR62Q9BZJ7 368 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 MTMR12Q9C0I1 747 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 NAT10Q9H0A0 1025 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 LMAN2LQ9H0V9 348 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 TLE6Q9H808 572 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 METTL14Q9HCE5 456 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 NGRNQ9NPE2 291 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.22□□□□□ -1.251e-6■■■■■ 46.6
PPP4R1-207ENST00000578010 TLR9Q9NR96 1032 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 MRPL17Q9NRX2 175 aaKnown RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 STK39Q9UEW8 545 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 ARMCX3Q9UH62 379 aaPredicted RBP7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 LZTS1Q9Y250 596 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 SSX2IPQ9Y2D8 614 aa7.22□□□□□ -1.25
PPP4R1-207ENST00000578010 LRRIQ3A6PVS8 624 aaPredicted RBP7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 PIRO00625 290 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 CYB561D2O14569 222 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 PPEF2O14830 753 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 IKBKBO14920 756 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 PER2O15055 1255 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 MAPK13O15264 365 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 STX10O60499 249 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 C4BPAP04003 597 aaKnown RBP7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 SOD2P04179 222 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 URODP06132 367 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 CTSAP10619 480 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 KLRC2P26717 231 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 MTIF2P46199 727 aaKnown RBP7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 TAF6P49848 677 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 ARPP19P56211 112 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 LILRA4P59901 499 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 BFSP1Q12934 665 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 MYO1EQ12965 1108 aa7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 SMC1AQ14683 1233 aaKnown RBP7.21□□□□□ -1.26
PPP4R1-207ENST00000578010 TIGD5Q53EQ6 642 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms