RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 ST6GALNAC4Q9H4F1 302 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 MRPL44Q9H9J2 332 aaKnown RBP17.43■□□□□ 0.38
VAPA-204ENST00000577901 MAGEF1Q9HAY2 307 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 TOPORSQ9NS56 1045 aaPredicted RBP17.43■□□□□ 0.38
VAPA-204ENST00000577901 KBTBD4Q9NVX7 518 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 ANKFY1Q9P2R3 1169 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 VWA8A3KMH1 1905 aa17.43■□□□□ 0.38
VAPA-204ENST00000577901 SMIM28A0A1B0GU29 152 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 LAMTOR5O43504 91 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 HARSP12081 509 aaKnown RBP17.42■□□□□ 0.38
VAPA-204ENST00000577901 CMA1P23946 247 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 BRCC3P46736 316 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 ZNF720Q7Z2F6 126 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 SFR1Q86XK3 245 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 C3orf58Q8NDZ4 430 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 MCRS1Q96EZ8 462 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 ZBTB45Q96K62 511 aaPredicted RBP17.42■□□□□ 0.38
VAPA-204ENST00000577901 ACAP3Q96P50 834 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 FIZ1Q96SL8 496 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 OSBPL6Q9BZF3 934 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 PANK4Q9NVE7 773 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 FBXO4Q9UKT5 387 aa17.42■□□□□ 0.38
VAPA-204ENST00000577901 HNRNPDLO14979 420 aaKnown RBP17.41■□□□□ 0.38
VAPA-204ENST00000577901 KINO60870 393 aaKnown RBP17.41■□□□□ 0.38
VAPA-204ENST00000577901 ECI2O75521 394 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 RHOP08100 348 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 CD72P21854 359 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 OSTNP61366 133 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 MCL1Q07820 350 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 NOLC1Q14978 699 aaKnown RBP eCLIP17.41■□□□□ 0.38
VAPA-204ENST00000577901 KYAT1Q16773 422 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 SLC5A9Q2M3M2 681 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 ZNF528Q3MIS6 628 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 CEP57L1Q8IYX8 460 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 DCLK2Q8N568 766 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 CEP120Q8N960 986 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 SUMF1Q8NBK3 374 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 CHAMP1Q96JM3 812 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 LTB4R2Q9NPC1 389 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 GDE1Q9NZC3 331 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 DOCK6Q96HP0 2047 aa17.41■□□□□ 0.38
VAPA-204ENST00000577901 FRMD3A2A2Y4 597 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 ABLIM1O14639 778 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 PRRG1O14668 218 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 PIGRP01833 764 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 LRG1P02750 347 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 PTPN2P17706 415 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 ELF1P32519 619 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 MAGEA9P43362 315 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 ROR1Q01973 937 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 SOX4Q06945 474 aaPredicted RBP17.4■□□□□ 0.38
VAPA-204ENST00000577901 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
VAPA-204ENST00000577901 XKR4Q5GH76 650 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 VARS2Q5ST30 1063 aaKnown RBP17.4■□□□□ 0.38
VAPA-204ENST00000577901 ZBTB41Q5SVQ8 909 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 SLC8B1Q6J4K2 584 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 ALKAL1Q6UXT8 129 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 TPRG1Q6ZUI0 275 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 MAP4K3Q8IVH8 894 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 ZNF461Q8TAF7 563 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 PLA2G2FQ9BZM2 168 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 TRIM9Q9C026 710 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 AVENQ9NQS1 362 aaPredicted RBP17.4■□□□□ 0.38
VAPA-204ENST00000577901 OLFML3Q9NRN5 406 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 TBC1D7Q9P0N9 293 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 EXOC7Q9UPT5 735 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 PCDHB13Q9Y5F0 798 aa17.4■□□□□ 0.38
VAPA-204ENST00000577901 A0A1B0GVL5 298 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 ARHGEF37A1IGU5 675 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 PODXLO00592 558 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 ABLIM3O94929 683 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 GCNT3O95395 438 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 CEBPBP17676 345 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 ASIC1P78348 528 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 CSTF1Q05048 431 aaKnown RBP17.39■□□□□ 0.37
VAPA-204ENST00000577901 ALCAMQ13740 583 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 SLFN12LQ6IEE8 588 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 CNNM4Q6P4Q7 775 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 STXBP4Q6ZWJ1 553 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 DGLUCYQ7Z3D6 616 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 ELSPBP1Q96BH3 223 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 BORCS6Q96GS4 357 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 ZMAT2Q96NC0 199 aaKnown RBP17.39■□□□□ 0.37
VAPA-204ENST00000577901 NELL2Q99435 816 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 C7orf25Q9BPX7 421 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 SLC38A7Q9NVC3 462 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 USP25Q9UHP3 1055 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 MIA3Q5JRA6 1907 aa17.39■□□□□ 0.37
VAPA-204ENST00000577901 NOTCH4Q99466 2003 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 CACNA1AO00555 2505 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 WDR27A2RRH5 827 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 SPTLC1O15269 473 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 CLTAP09496 248 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 SLFN14P0C7P3 912 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 TARSP26639 723 aaKnown RBP17.38■□□□□ 0.37
VAPA-204ENST00000577901 ANP32AP39687 249 aaKnown RBP17.38■□□□□ 0.37
VAPA-204ENST00000577901 ARPP19P56211 112 aa17.38■□□□□ 0.37
VAPA-204ENST00000577901 PUM1Q14671 1186 aaKnown RBP eCLIP17.38■□□□□ 0.372e-9■□□□□ 10.8
VAPA-204ENST00000577901 TANGO2Q6ICL3 276 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms