RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 VTNP04004 478 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 APODP05090 189 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 PYGLP06737 847 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 BRAFP15056 766 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 COL9A1P20849 921 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 KRT20P35900 424 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 GUCA1AP43080 201 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 RGS4P49798 205 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 ALDH5A1P51649 535 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF75DP51815 510 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 RTP1P59025 263 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 PNOCQ13519 176 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 SLC39A14Q15043 492 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 UAP1L1Q3KQV9 507 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 MMEL1Q495T6 779 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 DCAF6Q58WW2 860 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 GLRA4Q5JXX5 417 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 FAM46CQ5VWP2 391 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 SPATA1Q5VX52 437 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 SERPINA13PQ6UXR4 307 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 UNC13DQ70J99 1090 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 RRM2BQ7LG56 351 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 ERMP1Q7Z2K6 904 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 ZNF410Q86VK4 478 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 CLEC10AQ8IUN9 316 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 CHPFQ8IZ52 775 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 ATPAF2Q8N5M1 289 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 TTC8Q8TAM2 541 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 SDCCAG3Q96C92 435 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 HPDLQ96IR7 371 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 PAWRQ96IZ0 340 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 RBM41Q96IZ5 413 aaKnown RBP3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 MCCC1Q96RQ3 725 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 PLEKHF1Q96S99 279 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 NAPGQ99747 312 aaPredicted RBP3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 CYP26B1Q9NR63 512 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 LATS2Q9NRM7 1088 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 DPP3Q9NY33 737 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 HDAC6Q9UBN7 1215 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 CRLS1Q9UJA2 301 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 PKP3Q9Y446 797 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 MRFAP1Q9Y605 127 aa3.09□□□□□ -1.91
SMCHD1-203ENST00000577880 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PVALEFA0A1B0GWK0 134 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 POTEFA5A3E0 1075 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 SYNDIG1LA6NDD5 238 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CASTOR2A6NHX0 329 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 LRRIQ3A6PVS8 624 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 IFRD1O00458 451 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 KRIT1O00522 736 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 KCNK3O14649 394 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 INPP4BO15327 924 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 BUB1O43683 1085 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 SUN1O94901 812 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 F9P00740 461 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 DNTTP04053 509 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 RHOCP08134 193 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 SLFN14P0C7P3 912 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ZNF853P0CG23 659 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 POTEIP0CG38 1075 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PDHBP11177 359 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 SMARCA1P28370 1054 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CDC25AP30304 524 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ACOT2P49753 483 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 VCPP55072 806 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PFKPQ01813 784 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TAP1Q03518 808 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TLE2Q04725 743 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TGM3Q08188 693 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 MTX1Q13505 466 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 MTMR3Q13615 1198 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ELOAQ14241 798 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ACAP1Q15027 740 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HIST2H2ACQ16777 129 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 NOMO2Q5JPE7 1267 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 SH2D4BQ5SQS7 431 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PRAMEF19Q5SWL8 479 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ANKRD40Q6AI12 368 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HIST2H2AA3Q6FI13 130 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CCDC62Q6P9F0 684 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 POTEGQ6S5H5 508 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 POTEEQ6S8J3 1075 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CATSPERGQ6ZRH7 1159 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 GET4Q7L5D6 327 aaPredicted RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 CHMP1BQ7LBR1 199 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 PID1Q7Z2X4 250 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TRMT11Q7Z4G4 463 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 IFNL1Q8IU54 200 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 REPS2Q8NFH8 660 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 TRIM58Q8NG06 486 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HASPINQ8TF76 798 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 EXT2Q93063 718 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 HVCN1Q96D96 273 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 C18orf8Q96DM3 657 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 MRIQ9BWK5 157 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 IDI2Q9BXS1 227 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 BCO2Q9BYV7 579 aa3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 ZCCHC2Q9C0B9 1178 aaKnown RBP3.09□□□□□ -1.92
SMCHD1-203ENST00000577880 COPS7BQ9H9Q2 264 aaPredicted RBP3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms