RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 PPP2R3AQ06190 1150 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 PNOCQ13519 176 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 MRPL58Q14197 206 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 IQCB1Q15051 598 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 ENOX2Q16206 610 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 SEZ6Q53EL9 994 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 VARS2Q5ST30 1063 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 LIN9Q5TKA1 542 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 RRAGBQ5VZM2 374 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 RSPO2Q6UXX9 243 aaPredicted RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 SPATA31D4Q6ZUB0 917 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 ZSCAN30Q86W11 494 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 SFR1Q86XK3 245 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 CD302Q8IX05 232 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 FBXL6Q8N531 539 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 PDILTQ8N807 584 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 DDX12PQ92771 950 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 DHX58Q96C10 678 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 GSDMAQ96QA5 445 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 TRIM5Q9C035 493 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 OLFML3Q9NRN5 406 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 IGSF9Q9P2J2 1179 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 CPSF3Q9UKF6 684 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 UBQLN1Q9UMX0 589 aaKnown RBP11.49□□□□□ -0.57
LITAF-216ENST00000574848 CDY1Q9Y6F8 540 aa11.49□□□□□ -0.57
LITAF-216ENST00000574848 MYMKA6NI61 221 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ESPNB1AK53 854 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 I3L4J1 428 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 M0QZQ0 153 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ABLIM3O94929 683 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ASGR2P07307 311 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 OR1D2P34982 312 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 STAT6P42226 847 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ROR1Q01973 937 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 MYL5Q02045 173 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 DPCR1Q3MIW9 517 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ZBTB41Q5SVQ8 909 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 SV2BQ7L1I2 683 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ZNF720Q7Z2F6 126 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 AOPEPQ8N6M6 819 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 NXPE3Q969Y0 559 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 CCDC47Q96A33 483 aaKnown RBP11.48□□□□□ -0.57
LITAF-216ENST00000574848 PBXIP1Q96AQ6 731 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 FAM122AQ96E09 287 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 MYADMQ96S97 322 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 MSTO1Q9BUK6 570 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.48□□□□□ -0.57
LITAF-216ENST00000574848 LIMD1Q9UGP4 676 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 PCDHB8Q9UN66 801 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 DUSP12Q9UNI6 340 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 DERAQ9Y315 318 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 NUB1Q9Y5A7 615 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 PCDHA5Q9Y5H7 936 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ZFP37Q9Y6Q3 630 aaPredicted RBP11.48□□□□□ -0.57
LITAF-216ENST00000574848 NOTCH4Q99466 2003 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 MYO10Q9HD67 2058 aa11.48□□□□□ -0.57
LITAF-216ENST00000574848 ZDBF2Q9HCK1 2354 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ARHGEF37A1IGU5 675 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 WDR27A2RRH5 827 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 LACTBL1A8MY62 500 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ANKRD63C9JTQ0 380 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ANHXE9PGG2 379 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 H7C4K7 107 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 BIN1O00499 593 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 XPOTO43592 962 aaKnown RBP11.47□□□□□ -0.57
LITAF-216ENST00000574848 XYLBO75191 536 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 PAX3P23760 479 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 MATR3P43243 847 aaKnown RBP eCLIP11.47□□□□□ -0.57
LITAF-216ENST00000574848 TDGQ13569 410 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ALCAMQ13740 583 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 E2F4Q16254 413 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ZC2HC1CQ53FD0 456 aaPredicted RBP11.47□□□□□ -0.57
LITAF-216ENST00000574848 PPM1LQ5SGD2 360 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 SPATA1Q5VX52 437 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 SLFN12LQ6IEE8 588 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ZNF280DQ6N043 979 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 DYMQ7RTS9 669 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 SUGP1Q8IWZ8 645 aaKnown RBP11.47□□□□□ -0.57
LITAF-216ENST00000574848 DRC7Q8IY82 874 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ZNF461Q8TAF7 563 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 SLC7A14Q8TBB6 771 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 KIF12Q96FN5 646 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 LRRC27Q9C0I9 530 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 SMOC2Q9H3U7 446 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ZHX3Q9H4I2 956 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ASB7Q9H672 318 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 RPF1Q9H9Y2 349 aaKnown RBP11.47□□□□□ -0.57
LITAF-216ENST00000574848 KCNK12Q9HB15 430 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 PIDD1Q9HB75 910 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 AVENQ9NQS1 362 aaPredicted RBP11.47□□□□□ -0.57
LITAF-216ENST00000574848 MAFFQ9ULX9 164 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 C2CD2Q9Y426 696 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 WDFY4Q6ZS81 3184 aa11.47□□□□□ -0.57
LITAF-216ENST00000574848 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.46□□□□□ -0.57
LITAF-216ENST00000574848 TISP43B9A030 160 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 CBFA2T2O43439 604 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 MYBP10242 640 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 ATF2P15336 505 aa11.46□□□□□ -0.57
LITAF-216ENST00000574848 GBP2P32456 591 aaPredicted RBP11.46□□□□□ -0.57
LITAF-216ENST00000574848 ZNF75DP51815 510 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.8 ms