RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 MAPK4P31152 587 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 ARFIP2P53365 341 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 DSG1Q02413 1049 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 C2CD6Q53TS8 623 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 ZNF720Q7Z2F6 126 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 TPH2Q8IWU9 490 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 FAM178BQ8IXR5 827 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 ZCCHC9Q8N567 271 aaKnown RBP15.24■□□□□ 0.03
SMG6-215ENST00000574501 CFAP61Q8NHU2 1237 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 NCSTNQ92542 709 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 PARVGQ9HBI0 331 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 GTF3C4Q9UKN8 822 aa15.24■□□□□ 0.03
SMG6-215ENST00000574501 hCG_2014768A0A024R1R8 64 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 BANF1O75531 89 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 ABHD2P08910 425 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 BMP3P12645 472 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 GAP43P17677 238 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 SLC18A1P54219 525 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 SNAP25P60880 206 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 RASA3Q14644 834 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 LLGL2Q6P1M3 1020 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 FBXO27Q8NI29 283 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 CLPTM1LQ96KA5 538 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 FNBP1Q96RU3 617 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 ECSITQ9BQ95 431 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 CENPKQ9BS16 269 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 TMEM120AQ9BXJ8 343 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 LARSQ9P2J5 1176 aaKnown RBP15.23■□□□□ 0.03
SMG6-215ENST00000574501 ZNF652Q9Y2D9 606 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 LAMB2P55268 1798 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 PDLIM1O00151 329 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 SLC26A4O43511 780 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 CHMP2AO43633 222 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 LDHCP07864 332 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 ETS1P14921 441 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 ANPEPP15144 967 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 GJC1P36383 396 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 CDK7P50613 346 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 NOP14P78316 857 aaKnown RBP15.23■□□□□ 0.03
SMG6-215ENST00000574501 LSAMPQ13449 338 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 PICALMQ13492 652 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 CCDC62Q6P9F0 684 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 RELL1Q8IUW5 271 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 ZSWIM2Q8NEG5 633 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 LENG9Q96B70 501 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 TTC25Q96NG3 672 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 FIZ1Q96SL8 496 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 TRIM55Q9BYV6 548 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 SLC17A7Q9P2U7 560 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 UVRAGQ9P2Y5 699 aa15.23■□□□□ 0.03
SMG6-215ENST00000574501 PIK3CDO00329 1044 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 RFX1P22670 979 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 USP46P62068 366 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 EFTUD2Q15029 972 aaKnown RBP eCLIP15.22■□□□□ 0.03
SMG6-215ENST00000574501 QRICH1Q2TAL8 776 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 MDH1BQ5I0G3 518 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 TDRPQ86YL5 185 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 ZBED8Q8IZ13 594 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 ZNF398Q8TD17 642 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 TCP10LQ8TDR4 215 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 MBOAT7Q96N66 472 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 FHDC1Q9C0D6 1143 aaPredicted RBP15.22■□□□□ 0.03
SMG6-215ENST00000574501 MANSC1Q9H8J5 431 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 KCNK13Q9HB14 408 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 ANGPTL2Q9UKU9 493 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 H3BRJ5 948 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 MEIS2O14770 477 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 MSH4O15457 936 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 OPHN1O60890 802 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 RARBP10826 455 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 TAL1P17542 331 aaPredicted RBP15.22■□□□□ 0.03
SMG6-215ENST00000574501 NFIL3Q16649 462 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 LRRC36Q1X8D7 754 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 EPC2Q52LR7 807 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 ODR4Q5SWX8 454 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 C1orf186Q6ZWK4 172 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 ANKMY2Q8IV38 441 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 ZNF276Q8N554 614 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 SLC25A41Q8N5S1 370 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 BBOF1Q8ND07 529 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 SKA1Q96BD8 255 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 KREMEN1Q96MU8 473 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 HAPLN3Q96S86 360 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 TUBB6Q9BUF5 446 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 OSBPL8Q9BZF1 889 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 EBF3Q9H4W6 596 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 SENP1Q9P0U3 644 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 SLC4A7Q9Y6M7 1214 aa15.22■□□□□ 0.03
SMG6-215ENST00000574501 DOT1LQ8TEK3 1739 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 LOC102724428A0A0B4J2F2 783 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 B2RBV5 119 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 F5H6K3 240 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 ZSCAN9O15535 394 aaPredicted RBP15.21■□□□□ 0.03
SMG6-215ENST00000574501 HNRNPRO43390 633 aaKnown RBP15.21■□□□□ 0.03
SMG6-215ENST00000574501 KLRC2P26717 231 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 ADSSP30520 456 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 SIK1P57059 783 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 CDK16Q00536 496 aa15.21■□□□□ 0.03
SMG6-215ENST00000574501 DEUP1Q05D60 604 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms