RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 CPB2Q96IY4 423 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 TRIM31Q9BZY9 425 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 CISHQ9NSE2 258 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 ADAM21Q9UKJ8 722 aa11.16□□□□□ -0.62
USP43-205ENST00000574408 B4GALT4O60513 344 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 CUL1Q13616 776 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 ACVR2BQ13705 512 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 LLGL1Q15334 1064 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 CLUL1Q15846 466 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 LIN9Q5TKA1 542 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 MMS22LQ6ZRQ5 1243 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 NPLOC4Q8TAT6 608 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 NLRP7Q8WX94 980 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 ZNF606Q8WXB4 792 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 RUFY1Q96T51 708 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 TRIM51Q9BSJ1 452 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 NFKBIZQ9BYH8 718 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 DPH5Q9H2P9 285 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 ABHD16BQ9H3Z7 469 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 NXF1Q9UBU9 619 aaKnown RBP11.15□□□□□ -0.62
USP43-205ENST00000574408 CPA4Q9UI42 421 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 PCDHA3Q9Y5H8 950 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 MROH7Q68CQ1 1323 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 MYO1FO00160 1098 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 DAPK3O43293 454 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 HSF2BPO75031 334 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 STAG3L1P0CL83 205 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 BRD2P25440 801 aaKnown RBP11.15□□□□□ -0.62
USP43-205ENST00000574408 ZNF132P52740 706 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 RWDD2BP57060 319 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 MTHFD1LQ6UB35 978 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 LINC01465Q8N7H1 131 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 UBR7Q8N806 425 aa11.15□□□□□ -0.62
USP43-205ENST00000574408 MYO1CO00159 1063 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 MMP3P08254 477 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 NFICP08651 508 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 CTNNA2P26232 953 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 POU5F1Q01860 360 aaKnown RBP11.15□□□□□ -0.63
USP43-205ENST00000574408 GRIK4Q16099 956 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 PPP2R5EQ16537 467 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 AMHR2Q16671 573 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 TMEM130Q8N3G9 435 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 XYLT2Q9H1B5 865 aa11.15□□□□□ -0.63
USP43-205ENST00000574408 UTP11Q9Y3A2 253 aaKnown RBP11.15□□□□□ -0.63
USP43-205ENST00000574408 COL1A2P08123 1366 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 ZEB2O60315 1214 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 IL18RAPO95256 599 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 HSPA6P17066 643 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 DR1Q01658 176 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 POU5F1BQ06416 359 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 PDZD7Q9H5P4 517 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 POLIQ9UNA4 740 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 TCRBV7S2A1N4TA0A589 114 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 LACTBL1A8MY62 500 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 ATP2C2O75185 946 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 ARF4P18085 180 aaPredicted RBP11.14□□□□□ -0.63
USP43-205ENST00000574408 ECHS1P30084 290 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 FAM187BQ17R55 369 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 CFAP58Q5T655 872 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 FOXR1Q6PIV2 292 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 PHF13Q86YI8 300 aaPredicted RBP11.14□□□□□ -0.63
USP43-205ENST00000574408 PRELID2Q8N945 189 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 MAGOHBQ96A72 148 aaKnown RBP11.14□□□□□ -0.63
USP43-205ENST00000574408 NEUROG2Q9H2A3 272 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 FAM204AQ9H8W3 233 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 GINS2Q9Y248 185 aa11.14□□□□□ -0.63
USP43-205ENST00000574408 ADCY6O43306 1168 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 PHF2O75151 1096 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 GJB6O95452 261 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 MCF2P10911 925 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 ASPAP45381 313 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 HUNKP57058 714 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 DGKDQ16760 1214 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 PRAMEF19Q5SWL8 479 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 DAB2IPQ5VWQ8 1189 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 ALS2CLQ60I27 953 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 SLC13A5Q86YT5 568 aaPredicted RBP11.13□□□□□ -0.63
USP43-205ENST00000574408 ZDHHC14Q8IZN3 488 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 PPP1R13LQ8WUF5 828 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 C18orf8Q96DM3 657 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 KAT6AQ92794 2004 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 ERLIN2O94905 339 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 RAP1GAPP47736 663 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 JADE1Q6IE81 842 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
USP43-205ENST00000574408 C1orf131Q8NDD1 294 aaKnown RBP11.13□□□□□ -0.63
USP43-205ENST00000574408 EXOC4Q96A65 974 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 ZIM3Q96PE6 472 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 FAM49AQ9H0Q0 323 aaPredicted RBP11.13□□□□□ -0.63
USP43-205ENST00000574408 RAB17Q9H0T7 212 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 SETD4Q9NVD3 440 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 FEZ2Q9UHY8 353 aaPredicted RBP11.13□□□□□ -0.63
USP43-205ENST00000574408 SIX4Q9UIU6 781 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 DOCK3Q8IZD9 2030 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 SLC15A5A6NIM6 579 aa11.13□□□□□ -0.63
USP43-205ENST00000574408 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
USP43-205ENST00000574408 DYNC1LI2O43237 492 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms