RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 NCKAP1LP55160 1127 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 CACNB1Q02641 598 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-210ENST00000573903 FAM78AQ5JUQ0 283 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 HAUS6Q7Z4H7 955 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 MAML2Q8IZL2 1156 aaPredicted RBP13.26□□□□□ -0.29
CCDC40-210ENST00000573903 SMARCD2Q92925 531 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 CLDN23Q96B33 292 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 AK8Q96MA6 479 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 ASB16Q96NS5 453 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 PNMA5Q96PV4 448 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 GPR88Q9GZN0 384 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 RPF1Q9H9Y2 349 aaKnown RBP13.26□□□□□ -0.29
CCDC40-210ENST00000573903 NDRG2Q9UN36 371 aaKnown RBP13.26□□□□□ -0.29
CCDC40-210ENST00000573903 YIPF1Q9Y548 306 aa13.26□□□□□ -0.29
CCDC40-210ENST00000573903 CACNA1IQ9P0X4 2223 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 TICRRQ7Z2Z1 1910 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 TTC26A0AVF1 554 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 K7ELQ4 463 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-210ENST00000573903 M0QZQ0 153 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 ZNF263O14978 683 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 PSMC3P17980 439 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 FCARP24071 287 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 GDI1P31150 447 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 ABCD1P33897 745 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 UBA7P41226 1012 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 ALDH1A3P47895 512 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 EPHB3P54753 998 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 SPAG1Q07617 926 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 CUL4AQ13619 759 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 TMEM119Q4V9L6 283 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 GPBP1Q86WP2 473 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 YAF2Q8IY57 180 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 HS6ST3Q8IZP7 471 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 BEST2Q8NFU1 509 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 ZSCAN18Q8TBC5 510 aaPredicted RBP13.25□□□□□ -0.29
CCDC40-210ENST00000573903 E2F7Q96AV8 911 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 TSPAN18Q96SJ8 248 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 IER2Q9BTL4 223 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 ZSCAN32Q9NX65 697 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 CEP72Q9P209 647 aa13.25□□□□□ -0.29
CCDC40-210ENST00000573903 NPHP3-ACAD11A0A0J9YXS1 232 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 OGTO15294 1046 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 MEFVO15553 781 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 TBCAO75347 108 aaKnown RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 OAZ2O95190 189 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 BMP15O95972 392 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 ODC1P11926 461 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 PAX3P23760 479 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 CCR2P41597 374 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 EPHA5P54756 1037 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 DHX8Q14562 1220 aaKnown RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 PUM1Q14671 1186 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 VITQ6UXI7 678 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 DGLUCYQ7Z3D6 616 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 HSCBQ8IWL3 235 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 CD302Q8IX05 232 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 MYCT1Q8N699 235 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 GPR161Q8N6U8 529 aaKnown RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 SUMF1Q8NBK3 374 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 CSGALNACT1Q8TDX6 532 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 FAM3CQ92520 227 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 RMDN1Q96DB5 314 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 FAM212AQ96EL1 285 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 PGLYRP2Q96PD5 576 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 REEP2Q9BRK0 252 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 MSTO1Q9BUK6 570 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 FAM126AQ9BYI3 521 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 ZHX3Q9H4I2 956 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 PARVGQ9HBI0 331 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 ZNF334Q9HCZ1 680 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 TIMM13Q9Y5L4 95 aaPredicted RBP13.24□□□□□ -0.29
CCDC40-210ENST00000573903 PIAS3Q9Y6X2 628 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 DMDP11532 3685 aa13.24□□□□□ -0.29
CCDC40-210ENST00000573903 LACTBL1A8MY62 500 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 TRAK2O60296 914 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 FGF19O95750 216 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 OR4Q2P0C623 313 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 GJA1P17302 382 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 PDCP20941 246 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 TNFSF9P41273 254 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 NRLP54845 237 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 TEAD2Q15562 447 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 OVOS1Q6IE37 1185 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 C1orf228Q6PIY5 440 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 DCLK2Q8N568 766 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 ZBTB44Q8NCP5 570 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 MSANTD3Q96H12 275 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 PRMT8Q9NR22 394 aaPredicted RBP13.23□□□□□ -0.29
CCDC40-210ENST00000573903 RAB23Q9ULC3 237 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 TBX20Q9UMR3 447 aa13.23□□□□□ -0.29
CCDC40-210ENST00000573903 SMG5Q9UPR3 1016 aaKnown RBP13.23□□□□□ -0.29
CCDC40-210ENST00000573903 COL4A2P08572 1712 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 A0A1W2PRU2 124 aa13.22□□□□□ -0.29
CCDC40-210ENST00000573903 HEPACAM2A8MVW5 462 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms