RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PDCD4Q53EL6 469 aaKnown RBP6.08□□□□□ -1.44
CDC27-215ENST00000573550 MRGPREQ86SM8 312 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 RHOT2Q8IXI1 618 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 CPA6Q8N4T0 437 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 KAT5Q92993 513 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 LENG9Q96B70 501 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 TMX3Q96JJ7 454 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 DMRTA2Q96SC8 542 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 NRDE2Q9H7Z3 1164 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.08□□□□□ -1.44
CDC27-215ENST00000573550 LUC7L2Q9Y383 392 aaKnown RBP6.08□□□□□ -1.44
CDC27-215ENST00000573550 REXO2Q9Y3B8 237 aaKnown RBP6.08□□□□□ -1.44
CDC27-215ENST00000573550 USP15Q9Y4E8 981 aaPredicted RBP6.08□□□□□ -1.44
CDC27-215ENST00000573550 PCDHB1Q9Y5F3 818 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 SETBP1Q9Y6X0 1596 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 EFCAB6Q5THR3 1501 aa6.08□□□□□ -1.44
CDC27-215ENST00000573550 EIF3AQ14152 1382 aaKnown RBP6.07□□□□□ -1.44
CDC27-215ENST00000573550 MAP3K4Q9Y6R4 1608 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 GAGE12BA1L429 117 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 GAGE12HA6NDE8 117 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 MARCH11A6NNE9 402 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 CYR61O00622 381 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 ALDH1L1O75891 902 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 NCR1O76036 304 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 POMCP01189 267 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 MAKP20794 623 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 SLC6A2P23975 617 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 MCM7P33993 719 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 KLF10Q13118 480 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 UBXN2BQ14CS0 331 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 LRRC55Q6ZSA7 311 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 MED25Q71SY5 747 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 UBE3BQ7Z3V4 1068 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 ZFPM1Q8IX07 1006 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 MIER2Q8N344 545 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 HAS1Q92839 578 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 CLIP3Q96DZ5 547 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 FAM193BQ96PV7 902 aaPredicted RBP6.07□□□□□ -1.44
CDC27-215ENST00000573550 C11orf54Q9H0W9 315 aaPredicted RBP6.07□□□□□ -1.44
CDC27-215ENST00000573550 PCED1AQ9H1Q7 454 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 TCF7L1Q9HCS4 588 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 FZD1Q9UP38 647 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 HS3ST4Q9Y661 456 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 ASXL1Q8IXJ9 1541 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 NRXN1Q9ULB1 1477 aa6.07□□□□□ -1.44
CDC27-215ENST00000573550 KIF1BO60333 1816 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 ERCC6L2Q5T890 1561 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 RNASET2O00584 256 aaKnown RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 PRSS23O95084 383 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 SLPIP03973 132 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 ITGB1P05556 798 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 DSC2Q02487 901 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 MCL1Q07820 350 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 TTF1Q15361 905 aaPredicted RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 BEAN1Q3B7T3 259 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 USP51Q70EK9 711 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 RSPH3Q86UC2 560 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 NSUN6Q8TEA1 469 aaKnown RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 LARP4BQ92615 738 aaKnown RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 HOOK2Q96ED9 719 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 MYEOVQ96EZ4 313 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 PHACTR3Q96KR7 559 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 TESK2Q96S53 571 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 MLST8Q9BVC4 326 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 AKIP1Q9NQ31 210 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 KLHL11Q9NVR0 708 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 DKK2Q9UBU2 259 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 ING1Q9UK53 422 aaPredicted RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 CFAP20Q9Y6A4 193 aaKnown RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 ZC3H13Q5T200 1668 aaKnown RBP6.06□□□□□ -1.44
CDC27-215ENST00000573550 ABCA6Q8N139 1617 aa6.06□□□□□ -1.44
CDC27-215ENST00000573550 FANCAO15360 1455 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 TCRBV7S2A1N4TA0A589 114 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 ABLIM3O94929 683 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 SPATA31D3P0C874 917 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 ALAS1P13196 640 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 GCSHP23434 173 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 SLC6A4P31645 630 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 HNRNPMP52272 730 aaKnown RBP eCLIP6.05□□□□□ -1.44
CDC27-215ENST00000573550 TLE1Q04724 770 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 RAB39AQ14964 217 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 PPP4R3AQ6IN85 833 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 SPATA31D4Q6ZUB0 917 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 NGEFQ8N5V2 710 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 AMER2Q8N7J2 671 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 OR56A1Q8NGH5 318 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 HSPBAP1Q96EW2 488 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 CLPTM1LQ96KA5 538 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 AASDHPPTQ9NRN7 309 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 SRRDQ9UH36 339 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 DISP3Q9P2K9 1392 aa6.05□□□□□ -1.44
CDC27-215ENST00000573550 ADGRB3O60242 1522 aa6.04□□□□□ -1.44
CDC27-215ENST00000573550 CDHR4A6H8M9 788 aa6.04□□□□□ -1.44
CDC27-215ENST00000573550 ELANEP08246 267 aa6.04□□□□□ -1.44
CDC27-215ENST00000573550 ADH4P08319 380 aa6.04□□□□□ -1.44
CDC27-215ENST00000573550 SBK3P0C264 359 aa6.04□□□□□ -1.44
CDC27-215ENST00000573550 LAG3P18627 525 aa6.04□□□□□ -1.44
CDC27-215ENST00000573550 RRP1P56182 461 aaKnown RBP6.04□□□□□ -1.44
CDC27-215ENST00000573550 ZNF280AP59817 542 aaPredicted RBP6.04□□□□□ -1.44
CDC27-215ENST00000573550 TMF1P82094 1093 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms