RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 C1orf127Q8N9H9 656 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 PRSS33Q8NF86 280 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 PLEKHO2Q8TD55 490 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 EEF2KMTQ96G04 330 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 SUSD3Q96L08 255 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 POP1Q99575 1024 aaKnown RBP17.08■□□□□ 0.32
CHD3-215ENST00000572750 CDCA3Q99618 268 aaPredicted RBP17.08■□□□□ 0.32
CHD3-215ENST00000572750 CGRRF1Q99675 332 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 EMILIN2Q9BXX0 1053 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 INTS13Q9NVM9 706 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 HCFC2Q9Y5Z7 792 aa17.08■□□□□ 0.32
CHD3-215ENST00000572750 PIRO00625 290 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 SPTLC1O15269 473 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 DCXO43602 365 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 LTBRP36941 435 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 SURF1Q15526 300 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 CLUL1Q15846 466 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 PSMD5Q16401 504 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 NFIL3Q16649 462 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 KLHL10Q6JEL2 608 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 PIK3R5Q8WYR1 880 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 ANKRD36BP1Q96IX9 119 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 MFSD14AQ96MC6 490 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
CHD3-215ENST00000572750 CTNND2Q9UQB3 1225 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 SSX2IPQ9Y2D8 614 aa17.07■□□□□ 0.32
CHD3-215ENST00000572750 FSD2A1L4K1 749 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 PSMA7O14818 248 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 NCK2O43639 380 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 AKAP3O75969 853 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 KRT19P08727 400 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 EPCAMP16422 314 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 TNNI1P19237 187 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 AARSP49588 968 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHD3-215ENST00000572750 LILRA4P59901 499 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 ADAM15Q13444 863 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 STIM1Q13586 685 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 KCNC3Q14003 757 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 MYBPC2Q14324 1141 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 EDRF1Q3B7T1 1238 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 VARS2Q5ST30 1063 aaKnown RBP17.06■□□□□ 0.32
CHD3-215ENST00000572750 CENPPQ6IPU0 288 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 CXorf38Q8TB03 319 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 LNX1Q8TBB1 728 aaPredicted RBP17.06■□□□□ 0.32
CHD3-215ENST00000572750 CACTINQ8WUQ7 758 aaKnown RBP17.06■□□□□ 0.32
CHD3-215ENST00000572750 TSG101Q99816 390 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 RXFP1Q9HBX9 757 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.06■□□□□ 0.32
CHD3-215ENST00000572750 CLEC1BQ9P126 229 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 SIX4Q9UIU6 781 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 ITGA11Q9UKX5 1188 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 FRMD4BQ9Y2L6 1034 aa17.06■□□□□ 0.32
CHD3-215ENST00000572750 GRXCR2A6NFK2 248 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 LRRIQ3A6PVS8 624 aaPredicted RBP17.05■□□□□ 0.32
CHD3-215ENST00000572750 PPP1R3GB7ZBB8 358 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 SYN3O14994 580 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 ADAM12O43184 909 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 TNNC2P02585 160 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 ADH1AP07327 375 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 RPL13P26373 211 aaKnown RBP17.05■□□□□ 0.32
CHD3-215ENST00000572750 KLRC2P26717 231 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 TAF6P49848 677 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 CLCN4P51793 760 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 DLG4P78352 724 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 CREMQ03060 361 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 IER5LQ5T953 404 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 ANKRD40Q6AI12 368 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 PTCRAQ6ISU1 281 aaPredicted RBP17.05■□□□□ 0.32
CHD3-215ENST00000572750 DSTYKQ6XUX3 929 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 CSGALNACT2Q8N6G5 542 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 TRIML1Q8N9V2 468 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 ZNF560Q96MR9 790 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 MTRRQ9UBK8 725 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 PCDHB8Q9UN66 801 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 AGAP1Q9UPQ3 857 aa17.05■□□□□ 0.32
CHD3-215ENST00000572750 TIMM13Q9Y5L4 95 aaPredicted RBP17.05■□□□□ 0.32
CHD3-215ENST00000572750 ZFHX4Q86UP3 3567 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 M0QZQ0 153 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 SRGAP2BP0DMP2 458 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 ODC1P11926 461 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 LRRC63Q05C16 580 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 BFSP1Q12934 665 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 ADAM9Q13443 819 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 DUOXA2Q1HG44 320 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 SV2CQ496J9 727 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 PDXDC1Q6P996 788 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 ANKS3Q6ZW76 656 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 PALB2Q86YC2 1186 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 GPR65Q8IYL9 337 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 FAM186BQ8IYM0 893 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 PARD3BQ8TEW8 1205 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 SLC22A17Q8WUG5 538 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 NELFBQ8WX92 580 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 ZNF516Q92618 1163 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 SENP8Q96LD8 212 aa17.04■□□□□ 0.32
CHD3-215ENST00000572750 CLSTN3Q9BQT9 956 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms