RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 RFPL2O75678 378 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 B3GAT3O94766 335 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 WEE2P0C1S8 567 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 HOXB8P17481 243 aaPredicted RBP9.43□□□□□ -0.9
SMG6-210ENST00000572205 YARSP54577 528 aaKnown RBP9.43□□□□□ -0.9
SMG6-210ENST00000572205 NUCB2P80303 420 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 PPP2R3AQ06190 1150 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 PSMD5Q16401 504 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 PUS10Q3MIT2 529 aaKnown RBP9.43□□□□□ -0.9
SMG6-210ENST00000572205 KMT5BQ4FZB7 885 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
SMG6-210ENST00000572205 C9orf57Q5W0N0 161 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 DCLRE1AQ6PJP8 1040 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 APBB1IPQ7Z5R6 666 aaPredicted RBP9.43□□□□□ -0.9
SMG6-210ENST00000572205 CBWD2Q8IUF1 395 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 BEST2Q8NFU1 509 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 MICAL1Q8TDZ2 1067 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 TCHPQ9BT92 498 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 APOL5Q9BWW9 433 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 ADAM7Q9H2U9 754 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 ASB7Q9H672 318 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 SLC38A7Q9NVC3 462 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 DZANK1Q9NVP4 752 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 DMAC2Q9NW81 257 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 FAM13BQ9NYF5 915 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 UBQLN1Q9UMX0 589 aaKnown RBP9.43□□□□□ -0.9
SMG6-210ENST00000572205 DERAQ9Y315 318 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 BACE2Q9Y5Z0 518 aa9.43□□□□□ -0.9
SMG6-210ENST00000572205 GOLGA8IPA6NC78 632 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 GOLGA8JA6NMD2 632 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 EXTL3O43909 919 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 GADD45BO75293 160 aaPredicted RBP9.42□□□□□ -0.9
SMG6-210ENST00000572205 RHOBTB3O94955 611 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 RPL9P32969 192 aaKnown RBP9.42□□□□□ -0.9
SMG6-210ENST00000572205 SYKP43405 635 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 LILRA4P59901 499 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 MCCD1P59942 119 aaPredicted RBP9.42□□□□□ -0.9
SMG6-210ENST00000572205 ROR1Q01973 937 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 RAB33AQ14088 237 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 KYAT1Q16773 422 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 TMEM259Q4ZIN3 620 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 C1orf220Q5T0J3 134 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 SLFN12LQ6IEE8 588 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 LIMS2Q7Z4I7 341 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 GPR149Q86SP6 731 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 POMGNT1Q8WZA1 660 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 TSPAN18Q96SJ8 248 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 FAM213AQ9BRX8 229 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 CRISPLD1Q9H336 500 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 SFXN1Q9H9B4 322 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 RPF1Q9H9Y2 349 aaKnown RBP9.42□□□□□ -0.9
SMG6-210ENST00000572205 SLC39A2Q9NP94 309 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.42□□□□□ -0.9
SMG6-210ENST00000572205 HSPBP1Q9NZL4 362 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 USP25Q9UHP3 1055 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 ATP6V1DQ9Y5K8 247 aa9.42□□□□□ -0.9
SMG6-210ENST00000572205 ZDBF2Q9HCK1 2354 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 KIAA1549LQ6ZVL6 1849 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 SYN3O14994 580 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 TADA2AO75478 443 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 ABLIM3O94929 683 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 ZNF202O95125 648 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 GLUD1P00367 558 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 CYP11A1P05108 521 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 MYL1P05976 194 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 ADH1AP07327 375 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 POU2F2P09086 479 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 CLCN6P51797 869 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 ITIH3Q06033 890 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 ELAVL2Q12926 359 aaKnown RBP9.41□□□□□ -0.9
SMG6-210ENST00000572205 TMEM132DQ14C87 1099 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 RARS2Q5T160 578 aaKnown RBP9.41□□□□□ -0.9
SMG6-210ENST00000572205 C15orf39Q6ZRI6 1047 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 GLYCTKQ8IVS8 523 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 CD302Q8IX05 232 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 NELFCDQ8IXH7 590 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 GPD1LQ8N335 351 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 OR5B17Q8NGF7 314 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 OR10T2Q8NGX3 314 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 HDAC7Q8WUI4 952 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 PKMYT1Q99640 499 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 PYM1Q9BRP8 204 aaKnown RBP9.41□□□□□ -0.9
SMG6-210ENST00000572205 PHF7Q9BWX1 381 aaPredicted RBP9.41□□□□□ -0.9
SMG6-210ENST00000572205 EMILIN2Q9BXX0 1053 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 LRRC27Q9C0I9 530 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 PCIF1Q9H4Z3 704 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 TMEM206Q9H813 350 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 PDE11AQ9HCR9 933 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 RBAKQ9NYW8 714 aaPredicted RBP9.41□□□□□ -0.9
SMG6-210ENST00000572205 FBXL5Q9UKA1 691 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 NME7Q9Y5B8 376 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 CDY1Q9Y6F8 540 aa9.41□□□□□ -0.9
SMG6-210ENST00000572205 MYO16Q9Y6X6 1858 aa9.4□□□□□ -0.9
SMG6-210ENST00000572205 C2CD4DB7Z1M9 353 aa9.4□□□□□ -0.9
SMG6-210ENST00000572205 NR1I2O75469 434 aa9.4□□□□□ -0.9
SMG6-210ENST00000572205 OAZ2O95190 189 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms