RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 LILRA4P59901 499 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 TFAMQ00059 246 aaKnown RBP19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 ADCY1Q08828 1119 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 CUL4BQ13620 913 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 UVSSAQ2YD98 709 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 FAM26FQ5R3K3 315 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 UNC13DQ70J99 1090 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 NELFCDQ8IXH7 590 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 UBALD2Q8IYN6 164 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 CEP57L1Q8IYX8 460 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 ITFG1Q8TB96 612 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 SENP8Q96LD8 212 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 MFSD14AQ96MC6 490 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 PGLYRP2Q96PD5 576 aa19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 DNMT3BQ9UBC3 853 aaKnown RBP19.25■□□□□ 0.67
CTDNEP1-207ENST00000572043 VWA8A3KMH1 1905 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 MYH15Q9Y2K3 1946 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 PIRO00625 290 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 EXTL3O43909 919 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 LRG1P02750 347 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 ATF2P15336 505 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 HOXD13P35453 343 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 CDR1P51861 262 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 RNF19BQ6ZMZ0 732 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 BRSK2Q8IWQ3 736 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 ING5Q8WYH8 240 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 EPS15L1Q9UBC2 864 aa19.24■□□□□ 0.67
CTDNEP1-207ENST00000572043 ANO9A1A5B4 782 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 NARSO43776 548 aaKnown RBP19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 LDHAP00338 332 aaKnown RBP19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 ODC1P11926 461 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 LAMP2P13473 410 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 PFKFB1P16118 471 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 TDGQ13569 410 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 PABPC1LQ4VXU2 614 aaKnown RBP19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 OVOS1Q6IE37 1185 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 CNNM4Q6P4Q7 775 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 SUGP1Q8IWZ8 645 aaKnown RBP19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 GPD1LQ8N335 351 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 TMEM209Q96SK2 561 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 PYM1Q9BRP8 204 aaKnown RBP19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 PDE11AQ9HCR9 933 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 SLC39A2Q9NP94 309 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 INSL5Q9Y5Q6 135 aa19.23■□□□□ 0.67
CTDNEP1-207ENST00000572043 ACTN4O43707 911 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 OAZ2O95190 189 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 TAF6P49848 677 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 POU5F1Q01860 360 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 BECN1Q14457 450 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 TPGS2Q68CL5 300 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 LMBRD2Q68DH5 695 aaPredicted RBP19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 SCARA3Q6AZY7 606 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 BMP8AQ7Z5Y6 402 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 CBWD2Q8IUF1 395 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 PAGE5Q96GU1 130 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 CORO1BQ9BR76 489 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 GDPD2Q9HCC8 539 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 IGSF9Q9P2J2 1179 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 AFF4Q9UHB7 1163 aaKnown RBP19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 CDH7Q9ULB5 785 aa19.22■□□□□ 0.67
CTDNEP1-207ENST00000572043 BDP1A6H8Y1 2624 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 TRIP11Q15643 1979 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 ARHGEF37A1IGU5 675 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 CYB561D2O14569 222 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 CLIC2O15247 247 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 EIF3DO15371 548 aaKnown RBP eCLIP19.21■□□□□ 0.673e-16■□□□□ 8.3
CTDNEP1-207ENST00000572043 ITGB3P05106 788 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 RHOP08100 348 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 SLFN14P0C7P3 912 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 TYMPP19971 482 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 CMA1P23946 247 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 POLR2BP30876 1174 aaKnown RBP19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 TWF1Q12792 350 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 EPM2AIP1Q7L775 607 aaPredicted RBP19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 TCEAL8Q8IYN2 117 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 FBXL6Q8N531 539 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 RDH13Q8NBN7 331 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 ZNF507Q8TCN5 953 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 SCFD1Q8WVM8 642 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 FGF13Q92913 245 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 HSPBP1Q9NZL4 362 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 AGAP1Q9UPQ3 857 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 MRPS23Q9Y3D9 190 aaKnown RBP19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 ATP6V1DQ9Y5K8 247 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 NUMBLQ9Y6R0 609 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 C2orf16Q68DN1 1984 aa19.21■□□□□ 0.67
CTDNEP1-207ENST00000572043 DENND4AQ7Z401 1863 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 OR6C75A6NL08 312 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 TGFB1I1O43294 461 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 CFHP08603 1231 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 KRT19P08727 400 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 POU2F2P09086 479 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 CYP2J2P51589 502 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 VCPP55072 806 aaKnown RBP19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 EHHADHQ08426 723 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 SLC5A9Q2M3M2 681 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 RTL10Q7L3V2 364 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 NT5DC4Q86YG4 428 aa19.2■□□□□ 0.66
CTDNEP1-207ENST00000572043 SLC44A3Q8N4M1 653 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms