RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 ZNF512Q96ME7 567 aaPredicted RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 BACH2Q9BYV9 841 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 GPR88Q9GZN0 384 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 CUEDC2Q9H467 287 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 MRPL44Q9H9J2 332 aaKnown RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 ASAH2Q9NR71 780 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 OLFML3Q9NRN5 406 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 DNMT3BQ9UBC3 853 aaKnown RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 HSFX1Q9UBD0 423 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 FBXO2Q9UK22 296 aaPredicted RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 CPSF3Q9UKF6 684 aaKnown RBP10.57□□□□□ -0.72
CIITA-207ENST00000571545 CA14Q9ULX7 337 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 PCDHB13Q9Y5F0 798 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 CLIC4Q9Y696 253 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 STYXL1Q9Y6J8 313 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 DOCK6Q96HP0 2047 aa10.57□□□□□ -0.72
CIITA-207ENST00000571545 TCHHQ07283 1943 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ANK1P16157 1881 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 LACTBL1A8MY62 500 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 KIAA0391O15091 583 aaKnown RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 GFRA3O60609 400 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 LDHAP00338 332 aaKnown RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 HSP90AA1P07900 732 aaKnown RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 NPR3P17342 541 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 PNPLA4P41247 253 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 TNFSF9P41273 254 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 EPHB3P54753 998 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 NTHL1P78549 312 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 GRIN1Q05586 938 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 SLC39A14Q15043 492 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 MLF2Q15773 248 aaPredicted RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 OVOS1Q6IE37 1185 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 JADE1Q6IE81 842 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 PARM1Q6UWI2 310 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ZNF720Q7Z2F6 126 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 METTL23Q86XA0 190 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 SFR1Q86XK3 245 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 DTWD2Q8NBA8 298 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ITFG1Q8TB96 612 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 POMGNT1Q8WZA1 660 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 FGF14Q92915 247 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 E2F7Q96AV8 911 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ELSPBP1Q96BH3 223 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 BORCS6Q96GS4 357 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 EPSTI1Q96J88 318 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ZNF560Q96MR9 790 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 ACCSQ96QU6 501 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 FIZ1Q96SL8 496 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 CORO1BQ9BR76 489 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 OSBPL6Q9BZF3 934 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 SEMA4AQ9H3S1 761 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 TMEM206Q9H813 350 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 AGO2Q9UKV8 859 aaKnown RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 MRPS17Q9Y2R5 130 aaKnown RBP10.56□□□□□ -0.72
CIITA-207ENST00000571545 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 ASB3Q9Y575 518 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 TSC2P49815 1807 aa10.56□□□□□ -0.72
CIITA-207ENST00000571545 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 KRBA1A5PL33 1030 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 NCAM2O15394 837 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 MEFVO15553 781 aaPredicted RBP10.55□□□□□ -0.72
CIITA-207ENST00000571545 GCNT3O95395 438 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 IDEP14735 1019 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 GARTP22102 1010 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 NMT1P30419 496 aaKnown RBP10.55□□□□□ -0.72
CIITA-207ENST00000571545 ALDH1A3P47895 512 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 NASPP49321 788 aaPredicted RBP10.55□□□□□ -0.72
CIITA-207ENST00000571545 TAF6P49848 677 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 STARD6P59095 220 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 LILRA4P59901 499 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 AMPD3Q01432 767 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 TWF1Q12792 350 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 GPR17Q13304 367 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 STK38Q15208 465 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 ANGPT1Q15389 498 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 SV2CQ496J9 727 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 L1TD1Q5T7N2 865 aaKnown RBP10.55□□□□□ -0.72
CIITA-207ENST00000571545 C9orf57Q5W0N0 161 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 C1orf228Q6PIY5 440 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 DYMQ7RTS9 669 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 ITIH5Q86UX2 942 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 HSCBQ8IWL3 235 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 CCDC65Q8IXS2 484 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 THEM5Q8N1Q8 247 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 PJA1Q8NG27 643 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 C2orf15Q8WU43 125 aaKnown RBP10.55□□□□□ -0.72
CIITA-207ENST00000571545 DEPDC1BQ8WUY9 529 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 ING5Q8WYH8 240 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 DNASE1L2Q92874 299 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 NELL2Q99435 816 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 HAPLN2Q9GZV7 340 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 TNMDQ9H2S6 317 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 MAGEF1Q9HAY2 307 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 ZFP14Q9HCL3 533 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 HCFC1R1Q9NWW0 138 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 ZMYM5Q9UJ78 669 aa10.55□□□□□ -0.72
CIITA-207ENST00000571545 YIPF1Q9Y548 306 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms