RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 ALCAMQ13740 583 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 MPZL3Q6UWV2 235 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 ZPBP2Q6X784 338 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 APBB1IPQ7Z5R6 666 aaPredicted RBP14.48□□□□□ -0.09
CCDC40-205ENST00000571028 PALB2Q86YC2 1186 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 MAP4K3Q8IVH8 894 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 GPT2Q8TD30 523 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 HVCN1Q96D96 273 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 ST6GALNAC4Q9H4F1 302 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 SNTG2Q9NY99 539 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 RAB23Q9ULC3 237 aa14.48□□□□□ -0.09
CCDC40-205ENST00000571028 TPRP12270 2363 aaKnown RBP14.47□□□□□ -0.09
CCDC40-205ENST00000571028 FAM170BA6NMN3 283 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 CLDN3O15551 220 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 TOM1L1O75674 476 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 PPP1R37O75864 691 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 ADRB1P08588 477 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 ABCD1P33897 745 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 GPC5P78333 572 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 PFKPQ01813 784 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 EHHADHQ08426 723 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 PSMD2Q13200 908 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 NOLC1Q14978 699 aaKnown RBP eCLIP14.47□□□□□ -0.09
CCDC40-205ENST00000571028 MLF2Q15773 248 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-205ENST00000571028 DCAF4L1Q3SXM0 396 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 AGMOQ6ZNB7 445 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 MTSS1LQ765P7 747 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 SMYD4Q8IYR2 804 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-205ENST00000571028 HACE1Q8IYU2 909 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 CEP120Q8N960 986 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 KIAA0895Q8NCT3 520 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 POMGNT1Q8WZA1 660 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 ZNF707Q96C28 371 aaPredicted RBP14.47□□□□□ -0.09
CCDC40-205ENST00000571028 STRA6Q9BX79 667 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 PRKD2Q9BZL6 878 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 EPC1Q9H2F5 836 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 CLSTN2Q9H4D0 955 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 PCIF1Q9H4Z3 704 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 TMEM206Q9H813 350 aa14.47□□□□□ -0.09
CCDC40-205ENST00000571028 NCAM2O15394 837 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 TBC1D4O60343 1298 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 RHOBTB3O94955 611 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 MCF2P10911 925 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 SCP2P22307 547 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 KCNA4P22459 653 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 MLH1P40692 756 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 CREMQ03060 361 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 KCNB1Q14721 858 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 SLC39A4Q6P5W5 647 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 MRPL10Q7Z7H8 261 aaKnown RBP14.46□□□□□ -0.09
CCDC40-205ENST00000571028 GLYCTKQ8IVS8 523 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 ZNF507Q8TCN5 953 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 SCFD1Q8WVM8 642 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 GSDMAQ96QA5 445 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 GAD1Q99259 594 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 MSTO1Q9BUK6 570 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 CCDC94Q9BW85 323 aaPredicted RBP14.46□□□□□ -0.09
CCDC40-205ENST00000571028 HAPLN2Q9GZV7 340 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 NUP62CLQ9H1M0 184 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 RXFP1Q9HBX9 757 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 PTPRHQ9HD43 1115 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 UBN1Q9NPG3 1134 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.46□□□□□ -0.09
CCDC40-205ENST00000571028 RMND1Q9NWS8 449 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 MAN1B1Q9UKM7 699 aa14.46□□□□□ -0.09
CCDC40-205ENST00000571028 GOLGA8IPA6NC78 632 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 GOLGA8JA6NMD2 632 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 ABLIM1O14639 778 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 CLIC2O15247 247 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 EIF3DO15371 548 aaKnown RBP eCLIP14.45□□□□□ -0.1
CCDC40-205ENST00000571028 TGM5O43548 720 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 PIGRP01833 764 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 PROZP22891 400 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 DSG1Q02413 1049 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 MCL1Q07820 350 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 DMWDQ09019 674 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 SLC44A4Q53GD3 710 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 PPM1JQ5JR12 505 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 ZBTB41Q5SVQ8 909 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 SLFN12LQ6IEE8 588 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 ARMCX5Q6P1M9 558 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 PARM1Q6UWI2 310 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 EPM2AIP1Q7L775 607 aaPredicted RBP14.45□□□□□ -0.1
CCDC40-205ENST00000571028 TAS1R1Q7RTX1 841 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 ZBTB44Q8NCP5 570 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 FGF14Q92915 247 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 SAAL1Q96ER3 474 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 OSBPL6Q9BZF3 934 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 MARCH5Q9NX47 278 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 CDH7Q9ULB5 785 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 C2orf16Q68DN1 1984 aa14.45□□□□□ -0.1
CCDC40-205ENST00000571028 RECQL4O94761 1208 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 C1RP00736 705 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 HOXD13P35453 343 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 TNFSF9P41273 254 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 GRM5P41594 1212 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 ACOT2P49753 483 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 SCNN1GP51170 649 aa14.44□□□□□ -0.1
CCDC40-205ENST00000571028 CYP2J2P51589 502 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms