RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 HARSP12081 509 aaKnown RBP20.72■□□□□ 0.91
SCARF1-204ENST00000570902 GJA1P17302 382 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 CNR2P34972 360 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 SATB1Q01826 763 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 YWHAHQ04917 246 aaPredicted RBP20.72■□□□□ 0.91
SCARF1-204ENST00000570902 SIM2Q14190 667 aaPredicted RBP20.72■□□□□ 0.91
SCARF1-204ENST00000570902 NOLC1Q14978 699 aaKnown RBP eCLIP20.72■□□□□ 0.91
SCARF1-204ENST00000570902 TEAD2Q15562 447 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 RNF19BQ6ZMZ0 732 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 C4orf32Q8N8J7 132 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 IGSF22Q8N9C0 903 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 BEST2Q8NFU1 509 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 TIPINQ9BVW5 301 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 C8orf33Q9H7E9 229 aaPredicted RBP20.72■□□□□ 0.91
SCARF1-204ENST00000570902 F5P12259 2224 aa20.72■□□□□ 0.91
SCARF1-204ENST00000570902 CITO14578 2027 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 E9PMD0 336 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 SLC30A4O14863 429 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 CHADO15335 359 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 OAZ2O95190 189 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 ST3GAL1Q11201 340 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 PTGDRQ13258 359 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 SLC10A6Q3KNW5 377 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 KRT79Q5XKE5 535 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 SHKBP1Q8TBC3 707 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 LLPHQ9BRT6 129 aaKnown RBP20.71■□□□□ 0.91
SCARF1-204ENST00000570902 ANKFY1Q9P2R3 1169 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 YIPF1Q9Y548 306 aa20.71■□□□□ 0.91
SCARF1-204ENST00000570902 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.71■□□□□ 0.91
SCARF1-204ENST00000570902 EPG5Q9HCE0 2579 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 CACNA1BQ00975 2339 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 M0QZQ0 153 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 SLC16A4O15374 487 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 MEFVO15553 781 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-204ENST00000570902 FOXD2O60548 495 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-204ENST00000570902 PAPSS2O95340 614 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-204ENST00000570902 ADRB1P08588 477 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 KPNA1P52294 538 aaPredicted RBP20.7■□□□□ 0.9
SCARF1-204ENST00000570902 EPHB3P54753 998 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 FCHO2Q0JRZ9 810 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 RINT1Q6NUQ1 792 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 NTPCRQ9BSD7 190 aaKnown RBP20.7■□□□□ 0.9
SCARF1-204ENST00000570902 RUSC1Q9BVN2 902 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 PLEKHA5Q9HAU0 1116 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 SEMA4GQ9NTN9 838 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 TUBGCP4Q9UGJ1 667 aa20.7■□□□□ 0.9
SCARF1-204ENST00000570902 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-204ENST00000570902 A0A1W2PRU2 124 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 EIF5BO60841 1220 aaKnown RBP20.69■□□□□ 0.9
SCARF1-204ENST00000570902 KRT37O76014 449 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 ALDH1A3P47895 512 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 SMTNP53814 917 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 MAPK7Q13164 816 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 GAS6Q14393 721 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 CSRP2Q16527 193 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 DGKKQ5KSL6 1271 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 ZPBP2Q6X784 338 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 C1orf186Q6ZWK4 172 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-204ENST00000570902 USP37Q86T82 979 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 LONP2Q86WA8 852 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 FAM200AQ8TCP9 573 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 SPIRE2Q8WWL2 714 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 ZBTB45Q96K62 511 aaPredicted RBP20.69■□□□□ 0.9
SCARF1-204ENST00000570902 NCANO14594 1321 aa20.69■□□□□ 0.9
SCARF1-204ENST00000570902 OR6C75A6NL08 312 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 SLC38A8A6NNN8 435 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 CHURC1-FNTBB4DL54 471 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 LAD1O00515 517 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 CLDN3O15551 220 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 GUCY2CP25092 1073 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 LRPAP1P30533 357 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 FNTBP49356 437 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 HMGN5P82970 282 aaKnown RBP20.68■□□□□ 0.9
SCARF1-204ENST00000570902 PPM1JQ5JR12 505 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 PRR23CQ6ZRP0 262 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 TMC8Q8IU68 726 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 PGLYRP2Q96PD5 576 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 LRRC3Q9BY71 257 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 LIMCH1Q9UPQ0 1083 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 ASB3Q9Y575 518 aa20.68■□□□□ 0.9
SCARF1-204ENST00000570902 KMT2BQ9UMN6 2715 aaPredicted RBP20.68■□□□□ 0.9
SCARF1-204ENST00000570902 PDCD11Q14690 1871 aaKnown RBP20.67■□□□□ 0.9
SCARF1-204ENST00000570902 HRO43593 1189 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 FGF19O95750 216 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 CXCL8P10145 99 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 CYP3A5P20815 502 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 MCL1Q07820 350 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 DUSP4Q13115 394 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 GPR17Q13304 367 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 NBR1Q14596 966 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 SEZ6Q53EL9 994 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 HAUS6Q7Z4H7 955 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 RALGPS2Q86X27 583 aaPredicted RBP20.67■□□□□ 0.9
SCARF1-204ENST00000570902 ARID3BQ8IVW6 561 aaPredicted RBP20.67■□□□□ 0.9
SCARF1-204ENST00000570902 CCDC83Q8IWF9 413 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 FAM184AQ8NB25 1140 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 RSPRY1Q96DX4 576 aa20.67■□□□□ 0.9
SCARF1-204ENST00000570902 UBQLN1Q9UMX0 589 aaKnown RBP20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms