RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 UBQLN1Q9UMX0 589 aaKnown RBP16.41■□□□□ 0.22
RAB40B-203ENST00000570676 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
RAB40B-203ENST00000570676 SCN1AP35498 2009 aa16.41■□□□□ 0.22
RAB40B-203ENST00000570676 LACTBL1A8MY62 500 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 ANKRD63C9JTQ0 380 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 ABLIM3O94929 683 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 SMC2O95347 1197 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 LAMP2P13473 410 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 CYP3A5P20815 502 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 FSHRP23945 695 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 AARSP49588 968 aaKnown RBP eCLIP16.4■□□□□ 0.223e-6■■■■■ 61.8
RAB40B-203ENST00000570676 GUCY2FP51841 1108 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 ASIC1P78348 528 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 TCF15Q12870 199 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 DPYDQ12882 1025 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 HTR4Q13639 388 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 KYAT1Q16773 422 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 UVSSAQ2YD98 709 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 CWF19L1Q69YN2 538 aaKnown RBP16.4■□□□□ 0.22
RAB40B-203ENST00000570676 DDX12PQ92771 950 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 MSTO1Q9BUK6 570 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 STRA6Q9BX79 667 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 IKZF4Q9H2S9 585 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 HCFC1R1Q9NWW0 138 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 FBXL5Q9UKA1 691 aa16.4■□□□□ 0.22
RAB40B-203ENST00000570676 CPSF3Q9UKF6 684 aaKnown RBP16.4■□□□□ 0.22
RAB40B-203ENST00000570676 ANHXE9PGG2 379 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 M0QZQ0 153 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 PPEF2O14830 753 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 XYLBO75191 536 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 ABCD1P33897 745 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 ZNF280DQ6N043 979 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 CNNM4Q6P4Q7 775 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 RTL10Q7L3V2 364 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 TMEM105Q8N8V8 129 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 ZNF461Q8TAF7 563 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 SMARCE1Q969G3 411 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 HVCN1Q96D96 273 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 RPF1Q9H9Y2 349 aaKnown RBP16.39■□□□□ 0.21
RAB40B-203ENST00000570676 DNMT3BQ9UBC3 853 aaKnown RBP16.39■□□□□ 0.21
RAB40B-203ENST00000570676 PCDHB8Q9UN66 801 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 PCDHA5Q9Y5H7 936 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.39■□□□□ 0.21
RAB40B-203ENST00000570676 STYXL1Q9Y6J8 313 aa16.39■□□□□ 0.21
RAB40B-203ENST00000570676 COL4A3Q01955 1670 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 ARHGEF37A1IGU5 675 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 FRMD3A2A2Y4 597 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 H7C4K7 107 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 LETM1O95202 739 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-203ENST00000570676 NFICP08651 508 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 CTXN3Q4LDR2 81 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 JADE1Q6IE81 842 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 RBM43Q6ZSC3 357 aaKnown RBP16.38■□□□□ 0.21
RAB40B-203ENST00000570676 ZNF720Q7Z2F6 126 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 SLC44A3Q8N4M1 653 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 ITFG1Q8TB96 612 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 PRRX2Q99811 253 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 GZF1Q9H116 711 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-203ENST00000570676 KIAA1468Q9P260 1216 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 SEL1LQ9UBV2 794 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 CDH7Q9ULB5 785 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 POLIQ9UNA4 740 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
RAB40B-203ENST00000570676 NUMBLQ9Y6R0 609 aa16.38■□□□□ 0.21
RAB40B-203ENST00000570676 COL4A2P08572 1712 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 SEC24AO95486 1093 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 RPN1P04843 607 aaKnown RBP16.37■□□□□ 0.21
RAB40B-203ENST00000570676 IDEP14735 1019 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 ATF2P15336 505 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 NPR3P17342 541 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 PTPN5P54829 565 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 SLC5A9Q2M3M2 681 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 ZSCAN23Q3MJ62 389 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 SPATA1Q5VX52 437 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 CD302Q8IX05 232 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 TCEAL8Q8IYN2 117 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 APPL2Q8NEU8 664 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 ST13P5Q8NFI4 369 aaPredicted RBP16.37■□□□□ 0.21
RAB40B-203ENST00000570676 FGF13Q92913 245 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 NXPE3Q969Y0 559 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 CCDC47Q96A33 483 aaKnown RBP16.37■□□□□ 0.21
RAB40B-203ENST00000570676 TSPAN18Q96SJ8 248 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 FGFBP2Q9BYJ0 223 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 OLFML3Q9NRN5 406 aa16.37■□□□□ 0.21
RAB40B-203ENST00000570676 PVALEFA0A1B0GWK0 134 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 XPOTO43592 962 aaKnown RBP16.36■□□□□ 0.21
RAB40B-203ENST00000570676 SRFP11831 508 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 GAP43P17677 238 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 ADSSP30520 456 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 ACOT2P49753 483 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 CASP5P51878 434 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 NUBP1P53384 320 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 ARPP19P56211 112 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 KCNA1Q09470 495 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 PABPC1LQ4VXU2 614 aaKnown RBP16.36■□□□□ 0.21
RAB40B-203ENST00000570676 ASTLQ6HA08 431 aaPredicted RBP16.36■□□□□ 0.21
RAB40B-203ENST00000570676 CRELD2Q6UXH1 353 aaPredicted RBP16.36■□□□□ 0.21
RAB40B-203ENST00000570676 UNC13DQ70J99 1090 aa16.36■□□□□ 0.21
RAB40B-203ENST00000570676 NPAS3Q8IXF0 933 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms