RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 NXPE3Q969Y0 559 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 ZNF707Q96C28 371 aaPredicted RBP7.16□□□□□ -1.26
SMG6-204ENST00000570606 HSD17B14Q9BPX1 270 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 TTPALQ9BTX7 342 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 NT5C3AQ9H0P0 336 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 C2orf40Q9H1Z8 148 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 PDZD7Q9H5P4 517 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 TUFT1Q9NNX1 390 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 ARHGEF3Q9NR81 526 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 CHST7Q9NS84 486 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.16□□□□□ -1.26
SMG6-204ENST00000570606 FNIP2Q9P278 1114 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 WNT16Q9UBV4 365 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 FBXW11Q9UKB1 542 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 ZNF232Q9UNY5 417 aa7.16□□□□□ -1.26
SMG6-204ENST00000570606 PATJQ8NI35 1801 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 PDCD11Q14690 1871 aaKnown RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 F5P12259 2224 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 SPTBN2O15020 2390 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 GPR179Q6PRD1 2367 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 A0A087WWV3 80 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 A0A1B0GUA9 196 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 KRBA1A5PL33 1030 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 CCL16O15467 120 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 FZD6O60353 706 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 XYLBO75191 536 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 MED24O75448 989 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 EFEMP2O95967 443 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 C1RP00736 705 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 THP07101 528 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 C8AP07357 584 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 OR52Z1P0C646 297 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 CTSOP43234 321 aaPredicted RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 NAMPTP43490 491 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 EIF1AXP47813 144 aaKnown RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 GUCY1B3Q02153 619 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 ELAVL2Q12926 359 aaKnown RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 HTR4Q13639 388 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 GNL2Q13823 731 aaKnown RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 PPP2R5AQ15172 486 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 FAM187BQ17R55 369 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 DCAF4L1Q3SXM0 396 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 C4orf17Q53FE4 359 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 PPM1LQ5SGD2 360 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 FAM171A1Q5VUB5 890 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 HAUS3Q68CZ6 603 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 ZC3H14Q6PJT7 736 aaKnown RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 APBB1IPQ7Z5R6 666 aaPredicted RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 GPR65Q8IYL9 337 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 ADSSL1Q8N142 457 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 SLC44A3Q8N4M1 653 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 GSTCDQ8NEC7 633 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 ST13P5Q8NFI4 369 aaPredicted RBP7.15□□□□□ -1.26
SMG6-204ENST00000570606 PIK3R5Q8WYR1 880 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 IFT74Q96LB3 600 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 MTMR9Q96QG7 549 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 NACC1Q96RE7 527 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 PAAF1Q9BRP4 392 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 RBCK1Q9BYM8 510 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 PHACTR1Q9C0D0 580 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 TMEM60Q9H2L4 133 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 SNTG2Q9NY99 539 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 POLIQ9UNA4 740 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 GDAQ9Y2T3 454 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 NUMBLQ9Y6R0 609 aa7.15□□□□□ -1.26
SMG6-204ENST00000570606 NOTCH4Q99466 2003 aa7.15□□□□□ -1.27
SMG6-204ENST00000570606 PTGESO14684 152 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 AVPP01185 164 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 DCNP07585 359 aaKnown RBP7.14□□□□□ -1.27
SMG6-204ENST00000570606 HNRNPA1P09651 372 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMG6-204ENST00000570606 SPATA31C1P0DKV0 1188 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 XRCC6P12956 609 aaKnown RBP eCLIP7.14□□□□□ -1.27
SMG6-204ENST00000570606 LAMP2P13473 410 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 TXLNAP40222 546 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 NEK4P51957 841 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 NTHL1P78549 312 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 GLRA4Q5JXX5 417 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 PDXDC1Q6P996 788 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 LILRA6Q6PI73 481 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 DCLRE1AQ6PJP8 1040 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.14□□□□□ -1.27
SMG6-204ENST00000570606 MTSS1LQ765P7 747 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 GRASPQ7Z6J2 395 aaPredicted RBP7.14□□□□□ -1.27
SMG6-204ENST00000570606 CATSPER3Q86XQ3 398 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 NOSTRINQ8IVI9 506 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 ETFBKMTQ8IXQ9 262 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 RGL4Q8IZJ4 473 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 SLC7A14Q8TBB6 771 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 BSNDQ8WZ55 320 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 C8orf76Q96K31 380 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 POLR3CQ9BUI4 534 aaPredicted RBP7.14□□□□□ -1.27
SMG6-204ENST00000570606 KIFC3Q9BVG8 833 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 FZD8Q9H461 694 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 POLMQ9NP87 494 aaPredicted RBP7.14□□□□□ -1.27
SMG6-204ENST00000570606 CDH7Q9ULB5 785 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 USP20Q9Y2K6 914 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 ZFP37Q9Y6Q3 630 aaPredicted RBP7.14□□□□□ -1.27
SMG6-204ENST00000570606 R4GN57 208 aa7.14□□□□□ -1.27
SMG6-204ENST00000570606 COL4A3Q01955 1670 aa7.13□□□□□ -1.27
SMG6-204ENST00000570606 PHLPP2Q6ZVD8 1323 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms