RNA–Protein interactions for RNA: ENST00000570546.5

CIITA-204, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 2

Gene CIITA, Length 5,342 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-204ENST00000570546 CYB5D1Q6P9G0 228 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 INTS13Q9NVM9 706 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 CST8O60676 142 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 BMP6P22004 513 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 ELF1P32519 619 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 TMEM119Q4V9L6 283 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 DNAAF5Q86Y56 855 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 PPIL6Q8IXY8 311 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 ATP8B4Q8TF62 1192 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 AENQ8WTP8 325 aaKnown RBP16.13■□□□□ 0.17
CIITA-204ENST00000570546 HDAC7Q8WUI4 952 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 ATG4AQ8WYN0 398 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 LRFN2Q9ULH4 789 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 MCF2P10911 925 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 BRD2P25440 801 aaKnown RBP16.13■□□□□ 0.17
CIITA-204ENST00000570546 SULT1E1P49888 294 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 GEMIN4P57678 1058 aaKnown RBP16.13■□□□□ 0.17
CIITA-204ENST00000570546 RBP5P82980 135 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 EFTUD2Q15029 972 aaKnown RBP eCLIP16.13■□□□□ 0.17
CIITA-204ENST00000570546 STILQ15468 1287 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 CD248Q9HCU0 757 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 DONSONQ9NYP3 566 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 WHRNQ9P202 907 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 MTO1Q9Y2Z2 717 aaKnown RBP16.13■□□□□ 0.17
CIITA-204ENST00000570546 SMAPO00193 183 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 COL9A3Q14050 684 aaPredicted RBP16.13■□□□□ 0.17
CIITA-204ENST00000570546 CBWD2Q8IUF1 395 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 SPATA18Q8TC71 538 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 NIF3L1Q9GZT8 377 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 PCMTD2Q9NV79 361 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
CIITA-204ENST00000570546 L3MBTL1Q9Y468 752 aa16.13■□□□□ 0.17
CIITA-204ENST00000570546 LRRC10BA6NIK2 292 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 ATP9BO43861 1147 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 SPAG6O75602 509 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 ARP10275 920 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 GNAT1P11488 350 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 CYP11B1P15538 503 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 SERPINB9P50453 376 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 TMED1Q13445 227 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 CUL2Q13617 745 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 C3orf67Q6ZVT6 689 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 CCDC124Q96CT7 223 aaKnown RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 OTUD5Q96G74 571 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 ZNF560Q96MR9 790 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 MANSC1Q9H8J5 431 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 NOD2Q9HC29 1040 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 A0A0U1RQJ8 604 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 MAFGO15525 162 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 PYGBP11216 843 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 CYP4A22Q5TCH4 519 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 ZNF720Q7Z2F6 126 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 RDM1Q8NG50 284 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 SLC20A1Q8WUM9 679 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 CBWD1Q9BRT8 395 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 TMEM39BQ9GZU3 492 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 RSAD1Q9HA92 442 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 PAK5Q9P286 719 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 RARGP13631 454 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 NSUN2Q08J23 767 aaKnown RBP eCLIP16.12■□□□□ 0.17
CIITA-204ENST00000570546 TMEM132DQ14C87 1099 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 DNAL1Q4LDG9 190 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 TEDDM1Q5T9Z0 273 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 TTC39BQ5VTQ0 682 aaPredicted RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 ZNF280CQ8ND82 737 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 SEPT1Q8WYJ6 367 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 IFT43Q96FT9 208 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 GPRC5CQ9NQ84 441 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 MARCOQ9UEW3 520 aaPredicted RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 GTPBP10A4D1E9 387 aaKnown RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 KIF1CO43896 1103 aaKnown RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 ICAM1P05362 532 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 TXNP10599 105 aaKnown RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 ACTR2P61160 394 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 NFIAQ12857 509 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 HABP4Q5JVS0 413 aaKnown RBP16.12■□□□□ 0.17
CIITA-204ENST00000570546 TEX2Q8IWB9 1127 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 C17orf75Q9HAS0 396 aa16.12■□□□□ 0.17
CIITA-204ENST00000570546 ERFP50548 548 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 PSMC6P62333 389 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 XRRA1Q6P2D8 792 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 GIPC2Q8TF65 315 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 ACSF2Q96CM8 615 aaPredicted RBP16.11■□□□□ 0.17
CIITA-204ENST00000570546 NRBF2Q96F24 287 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 FGD4Q96M96 766 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 OLFM3Q96PB7 478 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 TLR10Q9BXR5 811 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 BATF3Q9NR55 127 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 SCTRP47872 440 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 FASTKD1Q53R41 847 aaKnown RBP16.11■□□□□ 0.17
CIITA-204ENST00000570546 C1orf131Q8NDD1 294 aaKnown RBP16.11■□□□□ 0.17
CIITA-204ENST00000570546 GMCL1P1Q8NEA9 526 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 METTL5Q9NRN9 209 aaKnown RBP16.11■□□□□ 0.17
CIITA-204ENST00000570546 ZSCAN5CA6NGD5 496 aaPredicted RBP16.11■□□□□ 0.17
CIITA-204ENST00000570546 ZNF189O75820 626 aaPredicted RBP16.11■□□□□ 0.17
CIITA-204ENST00000570546 IL18RAPO95256 599 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 TSPY1Q01534 308 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 DNAJC3Q13217 504 aa16.11■□□□□ 0.17
CIITA-204ENST00000570546 MTM1Q13496 603 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms