RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 PRRG1O14668 218 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 IL18RAPO95256 599 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CYP11A1P05108 521 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 RHOP08100 348 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MYBPC2Q14324 1141 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 STK38Q15208 465 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PRSS36Q5K4E3 855 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 C9orf57Q5W0N0 161 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PHLDB3Q6NSJ2 640 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CRELD2Q6UXH1 353 aaPredicted RBP18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 LEMD2Q8NC56 503 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ITFG1Q8TB96 612 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 FGF14Q92915 247 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ACCSQ96QU6 501 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 LRRC27Q9C0I9 530 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 KBTBD4Q9NVX7 518 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 HSFX1Q9UBD0 423 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 FBXL21Q9UKT6 434 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 POLIQ9UNA4 740 aa18.53■□□□□ 0.56
MAP1LC3B-208ENST00000570189 KRBA1A5PL33 1030 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 TISP43B9A030 160 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SEC24AO95486 1093 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 NFICP08651 508 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 GARTP22102 1010 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ACOT2P49753 483 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 EPHA5P54756 1037 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 GPR17Q13304 367 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 ATL3Q6DD88 541 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PARM1Q6UWI2 310 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 HSCBQ8IWL3 235 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 SIX5Q8N196 739 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 CYP4F11Q9HBI6 524 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 FOXD4L1Q9NU39 408 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 MIA3Q5JRA6 1907 aa18.52■□□□□ 0.56
MAP1LC3B-208ENST00000570189 PPEF2O14830 753 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 KIAA0391O15091 583 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CUTAO60888 179 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 LDHAP00338 332 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ODC1P11926 461 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 MRE11P49959 708 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 GUCY2FP51841 1108 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ADCY1Q08828 1119 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 KCNA1Q09470 495 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 SLC5A9Q2M3M2 681 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 OVOS1Q6IE37 1185 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 TMEM130Q8N3G9 435 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 POMGNT1Q8WZA1 660 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 MAGEF1Q9HAY2 307 aa18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 MRPS23Q9Y3D9 190 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3B-208ENST00000570189 USP34Q70CQ2 3546 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ZNF197O14709 1029 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ECI2O75521 394 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 GCNT3O95395 438 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 VNN2O95498 520 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ZSCAN22P10073 491 aaPredicted RBP18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CPB1P15086 417 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CASP5P51878 434 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 DSTYKQ6XUX3 929 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 RNF19BQ6ZMZ0 732 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 USP37Q86T82 979 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 BRSK2Q8IWQ3 736 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CCDC65Q8IXS2 484 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CCDC105Q8IYK2 499 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ELMOD1Q8N336 334 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 GPR152Q8TDT2 470 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 SENP8Q96LD8 212 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 TMEM206Q9H813 350 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 PANK4Q9NVE7 773 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 DSEQ9UL01 958 aa18.5■□□□□ 0.55
MAP1LC3B-208ENST00000570189 PROB1E7EW31 1015 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 SPTLC1O15269 473 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 F13A1P00488 732 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CFHP08603 1231 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ARPP19P56211 112 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 STARD6P59095 220 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 PLD1Q13393 1074 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ALYREFQ86V81 257 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 KCNG4Q8TDN1 519 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 RPP25Q9BUL9 199 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 DDX23Q9BUQ8 820 aaKnown RBP18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 TRIM9Q9C026 710 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ARHGEF3Q9NR81 526 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 DPP3Q9NY33 737 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 CEP72Q9P209 647 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 NUP210Q8TEM1 1887 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 DENND4CQ5VZ89 1909 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 COL4A2P08572 1712 aa18.49■□□□□ 0.55
MAP1LC3B-208ENST00000570189 IDEP14735 1019 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 TAF6P49848 677 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 AMPD3Q01432 767 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 PFKPQ01813 784 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 SMARCB1Q12824 385 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 IQCEQ6IPM2 695 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 SHC4Q6S5L8 630 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 STXBP4Q6ZWJ1 553 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 EFCAB13Q8IY85 973 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 PDILTQ8N807 584 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 IQUBQ8NA54 791 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 FLCNQ8NFG4 579 aa18.48■□□□□ 0.55
MAP1LC3B-208ENST00000570189 ELSPBP1Q96BH3 223 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms