RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ABLIM3O94929 683 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 HNRNPA1P09651 372 aaKnown RBP eCLIP14.11□□□□□ -0.15
CNOT1-220ENST00000569916 SYKP43405 635 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 LILRA4P59901 499 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 BMT2Q1RMZ1 405 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 CTXN3Q4LDR2 81 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 TMEM31Q5JXX7 168 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 PPM1LQ5SGD2 360 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 ZNF280DQ6N043 979 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 NT5DC4Q86YG4 428 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 FSIP1Q8NA03 581 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 ZNF461Q8TAF7 563 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 SLC7A14Q8TBB6 771 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 PIDD1Q9HB75 910 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 SLC39A2Q9NP94 309 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 AGPAT3Q9NRZ7 376 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 DPP3Q9NY33 737 aa14.11□□□□□ -0.15
CNOT1-220ENST00000569916 TIMM13Q9Y5L4 95 aaPredicted RBP14.11□□□□□ -0.15
CNOT1-220ENST00000569916 N4BP1O75113 896 aaKnown RBP14.1□□□□□ -0.15
CNOT1-220ENST00000569916 OAZ2O95190 189 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 POU2F2P09086 479 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 ATXN8OSP0DMR3 200 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 PAX3P23760 479 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 YWHAHQ04917 246 aaPredicted RBP14.1□□□□□ -0.15
CNOT1-220ENST00000569916 PTPN21Q16825 1174 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 UVSSAQ2YD98 709 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 DSTYKQ6XUX3 929 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 OTOP3Q7RTS5 596 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 NELFCDQ8IXH7 590 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 ZDHHC14Q8IZN3 488 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 NOC3LQ8WTT2 800 aaKnown RBP14.1□□□□□ -0.15
CNOT1-220ENST00000569916 SENP8Q96LD8 212 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 LRFN3Q9BTN0 628 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 HSPBP1Q9NZL4 362 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 MYO10Q9HD67 2058 aa14.1□□□□□ -0.15
CNOT1-220ENST00000569916 CCL16O15467 120 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 MYL1P05976 194 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 PRR29P0C7W0 189 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 ODC1P11926 461 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 ATF2P15336 505 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 TYMPP19971 482 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 TAF6P49848 677 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 ARPP19P56211 112 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 ZXDAP98168 799 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 TFAMQ00059 246 aaKnown RBP14.09□□□□□ -0.15
CNOT1-220ENST00000569916 KMT5BQ4FZB7 885 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 KRBA2Q6ZNG9 492 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 RTL10Q7L3V2 364 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 CBWD2Q8IUF1 395 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 PLCD3Q8N3E9 789 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 C1orf127Q8N9H9 656 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 KIAA0895Q8NCT3 520 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 EDAQ92838 391 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 ACSF2Q96CM8 615 aaPredicted RBP14.09□□□□□ -0.15
CNOT1-220ENST00000569916 FAM84AQ96KN4 292 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 PDE11AQ9HCR9 933 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 EXOC1Q9NV70 894 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 PTPRJQ12913 1337 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 TECTAO75443 2155 aa14.09□□□□□ -0.15
CNOT1-220ENST00000569916 ARHGEF37A1IGU5 675 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 ZNF233A6NK53 670 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 PRR33A8MZF0 331 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 CLIC2O15247 247 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 XYLBO75191 536 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 SEC24AO95486 1093 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 ITGB3P05106 788 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 CYP11A1P05108 521 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 ASGR2P07307 311 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 CPB1P15086 417 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 SNRPFP62306 86 aaKnown RBP14.08□□□□□ -0.16
CNOT1-220ENST00000569916 STK4Q13043 487 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 KNOP1Q1ED39 458 aaKnown RBP14.08□□□□□ -0.16
CNOT1-220ENST00000569916 TPGS2Q68CL5 300 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 OVOS1Q6IE37 1185 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 GRASPQ7Z6J2 395 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-220ENST00000569916 USP37Q86T82 979 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 CXorf38Q8TB03 319 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 BORCS6Q96GS4 357 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 ZNF560Q96MR9 790 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 MYADMQ96S97 322 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 OXCT2Q9BYC2 517 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-220ENST00000569916 MTMR12Q9C0I1 747 aa14.08□□□□□ -0.16
CNOT1-220ENST00000569916 AFF4Q9UHB7 1163 aaKnown RBP14.08□□□□□ -0.16
CNOT1-220ENST00000569916 ZNF202O95125 648 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 RPN1P04843 607 aaKnown RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 OR4Q2P0C623 313 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 GBP2P32456 591 aaPredicted RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 NTHL1P78549 312 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 DPYDQ12882 1025 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 PSMD2Q13200 908 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 SNRNP35Q16560 246 aaKnown RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 SV2CQ496J9 727 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 LMBRD2Q68DH5 695 aaPredicted RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 SCARA3Q6AZY7 606 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 RNF19BQ6ZMZ0 732 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 GET4Q7L5D6 327 aaPredicted RBP14.07□□□□□ -0.16
CNOT1-220ENST00000569916 HS2ST1Q7LGA3 356 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 C12orf56Q8IXR9 622 aa14.07□□□□□ -0.16
CNOT1-220ENST00000569916 TCEAL8Q8IYN2 117 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms