RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 TNIP3Q96KP6 325 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 RNPEPQ9H4A4 650 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 VRTNQ9H8Y1 702 aa6.43□□□□□ -1.38
CYLD-216ENST00000569891 DDX56Q9NY93 547 aaKnown RBP6.43□□□□□ -1.38
CYLD-216ENST00000569891 A6NNZ2 444 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 OPA1O60313 960 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 DARSP14868 501 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 MAP2K2P36507 400 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 AMPD2Q01433 879 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 MTMR3Q13615 1198 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TUBB8Q3ZCM7 444 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SGO2Q562F6 1265 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TDRD10Q5VZ19 366 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 WDR93Q6P2C0 686 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TAS1R3Q7RTX0 852 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 RBM41Q96IZ5 413 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 FAM114A2Q9NRY5 505 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.42□□□□□ -1.38
CYLD-216ENST00000569891 MTRF1LQ9UGC7 380 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 GINS2Q9Y248 185 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SQORQ9Y6N5 450 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 A0A1B0GUA9 196 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 IGF2BP3O00425 579 aaKnown RBP eCLIP6.42□□□□□ -1.38
CYLD-216ENST00000569891 KRIT1O00522 736 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 ENC1O14682 589 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 HMGCRP04035 888 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TNNT3P45378 269 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 PIGHQ14442 188 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 ACAP1Q15027 740 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 EMBQ6PCB8 327 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SYDE1Q6ZW31 735 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 UNC93AQ86WB7 457 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 CNPY4Q8N129 248 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TRIM62Q9BVG3 475 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 NUP85Q9BW27 656 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SNX25Q9H3E2 840 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 DPP3Q9NY33 737 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TTC7AQ9ULT0 858 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 GNEQ9Y223 722 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 MBLAC1A4D2B0 266 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 CARNS1A5YM72 827 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 FAM187AA6NFU0 413 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 TISP43B9A030 160 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 PODXLO00592 558 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 GAS8O95995 478 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 CYP1A2P05177 515 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 ZNF865P0CJ78 1059 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 SSR1P43307 286 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 EPHB4P54760 987 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 CRHR2Q13324 411 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 DHX34Q14147 1143 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 LONRF2Q1L5Z9 754 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 CFAP58Q5T655 872 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 GJB7Q6PEY0 223 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 PHF13Q86YI8 300 aaPredicted RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 EFCAB13Q8IY85 973 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SPATA18Q8TC71 538 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 HPDLQ96IR7 371 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 MMS19Q96T76 1030 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 PTPN18Q99952 460 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 MTMR12Q9C0I1 747 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 SETD4Q9NVD3 440 aa6.42□□□□□ -1.38
CYLD-216ENST00000569891 PIN4Q9Y237 131 aaKnown RBP6.42□□□□□ -1.38
CYLD-216ENST00000569891 RPS6KA5O75582 802 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 RNF8O76064 485 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CAPN2P17655 700 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 NNTQ13423 1086 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 TWF2Q6IBS0 349 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 DPH6Q7L8W6 267 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 METTL23Q86XA0 190 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 RHOT1Q8IXI2 618 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 KIAA0319LQ8IZA0 1049 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 SPATA4Q8NEY3 305 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 WHAMMQ8TF30 809 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 USP6NLQ92738 828 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 GLT1D1Q96MS3 346 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 NT5C1AQ9BXI3 368 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 FRMD8P1Q9BZ68 369 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 IRX2Q9BZI1 471 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 KATNBL1Q9H079 304 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 NXF1Q9UBU9 619 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 PASKQ96RG2 1323 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 PSTPIP1O43586 416 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 HUS1O60921 280 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ABCB7O75027 752 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ECM2O94769 699 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 SGPL1O95470 568 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 FTCDO95954 541 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 VTNP04004 478 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 CHRNA3P32297 505 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ACADSBP45954 432 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 MRPS6P82932 125 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 CENPCQ03188 943 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ZDHHC17Q8IUH5 632 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 LINC01465Q8N7H1 131 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 SLAIN1Q8ND83 568 aa6.41□□□□□ -1.38
CYLD-216ENST00000569891 ZBTB45Q96K62 511 aaPredicted RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 TSEN34Q9BSV6 310 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 CELF4Q9BZC1 486 aaKnown RBP6.41□□□□□ -1.38
CYLD-216ENST00000569891 LHX5Q9H2C1 402 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms