RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 CXCL14O95715 111 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 EFEMP2O95967 443 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 TKTP29401 623 aaKnown RBP14.06□□□□□ -0.16
CNOT1-217ENST00000569263 GTF2H1P32780 548 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 MXI1P50539 228 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 MARSP56192 900 aaKnown RBP14.06□□□□□ -0.16
CNOT1-217ENST00000569263 MYL5Q02045 173 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 DSG1Q02413 1049 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 CREMQ03060 361 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 PPP3CAQ08209 521 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 CAMK1Q14012 370 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 PTPN14Q15678 1187 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 C1orf220Q5T0J3 134 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 PDXDC1Q6P996 788 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 TAS1R1Q7RTX1 841 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 APPL2Q8NEU8 664 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 ENOX1Q8TC92 643 aaKnown RBP14.06□□□□□ -0.16
CNOT1-217ENST00000569263 RIN2Q8WYP3 895 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-217ENST00000569263 HPDLQ96IR7 371 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 IMPG2Q9BZV3 1241 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 NSUN3Q9H649 340 aaKnown RBP14.06□□□□□ -0.16
CNOT1-217ENST00000569263 TMEM8AQ9HCN3 771 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 PCDHGC5Q9Y5F6 944 aa14.06□□□□□ -0.16
CNOT1-217ENST00000569263 KPNA7A9QM74 516 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 SPTLC1O15269 473 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 C4BPAP04003 597 aaKnown RBP14.05□□□□□ -0.16
CNOT1-217ENST00000569263 POU3F3P20264 500 aaPredicted RBP14.05□□□□□ -0.16
CNOT1-217ENST00000569263 FGFR3P22607 806 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 ATICP31939 592 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 MTIF2P46199 727 aaKnown RBP14.05□□□□□ -0.16
CNOT1-217ENST00000569263 AARSP49588 968 aaKnown RBP eCLIP14.05□□□□□ -0.16
CNOT1-217ENST00000569263 NCOA4Q13772 614 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 PSMD5Q16401 504 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 ZNF699Q32M78 642 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 ZACNQ401N2 412 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 HSP90AA4PQ58FG1 418 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 RTP2Q5QGT7 225 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 KRT39Q6A163 491 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 SV2AQ7L0J3 742 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 AOPEPQ8N6M6 819 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 CCDC150Q8NCX0 1101 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 CXorf38Q8TB03 319 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 SLC35C1Q96A29 364 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 SENP8Q96LD8 212 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 EMILIN2Q9BXX0 1053 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.05□□□□□ -0.16
CNOT1-217ENST00000569263 CHST7Q9NS84 486 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 PCDHB8Q9UN66 801 aa14.05□□□□□ -0.16
CNOT1-217ENST00000569263 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.05□□□□□ -0.16
CNOT1-217ENST00000569263 C2orf71A6NGG8 1288 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 HIDE1A8MVS5 230 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 H7C4K7 107 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 M0QZQ0 153 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 CYB561D2O14569 222 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 HUS1O60921 280 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 N4BP1O75113 896 aaKnown RBP14.04□□□□□ -0.16
CNOT1-217ENST00000569263 HLA-DRAP01903 254 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 MYL6P60660 151 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 MYL7Q01449 175 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 ZNF280DQ6N043 979 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 PRSS55Q6UWB4 352 aaPredicted RBP14.04□□□□□ -0.16
CNOT1-217ENST00000569263 C15orf39Q6ZRI6 1047 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 ANKS3Q6ZW76 656 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 ADGRD2Q7Z7M1 963 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 METTL23Q86XA0 190 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 TRIM59Q8IWR1 403 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 GPR65Q8IYL9 337 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 MRPL43Q8N983 215 aaKnown RBP14.04□□□□□ -0.16
CNOT1-217ENST00000569263 PIK3R5Q8WYR1 880 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 BPIFA3Q9BQP9 254 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 FUCA2Q9BTY2 467 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 TLE6Q9H808 572 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 SAMSN1Q9NSI8 373 aaKnown RBP14.04□□□□□ -0.16
CNOT1-217ENST00000569263 DSEQ9UL01 958 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 TIMM13Q9Y5L4 95 aaPredicted RBP14.04□□□□□ -0.16
CNOT1-217ENST00000569263 SNX9Q9Y5X1 595 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 IRAK3Q9Y616 596 aa14.04□□□□□ -0.16
CNOT1-217ENST00000569263 PRRC2BQ5JSZ5 2229 aaKnown RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 KCNJ18B7U540 433 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 VNN1O95497 513 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 CST3P01034 146 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 AFPP02771 609 aaKnown RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 P4HA1P13674 534 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 PRKCSHP14314 528 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 TYMPP19971 482 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 NRIP1P48552 1158 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 FMO5P49326 533 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 ZNF165P49910 485 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 MCCD1P59942 119 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 TNNC1P63316 161 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 YWHAHQ04917 246 aaPredicted RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 CETN1Q12798 172 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 KCNJ12Q14500 433 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 SGSM1Q2NKQ1 1148 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 TCEAL5Q5H9L2 206 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 ZNF667Q5HYK9 610 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 VARS2Q5ST30 1063 aaKnown RBP14.03□□□□□ -0.16
CNOT1-217ENST00000569263 KIAA0319Q5VV43 1072 aa14.03□□□□□ -0.16
CNOT1-217ENST00000569263 SCARA3Q6AZY7 606 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms