RNA–Protein interactions for RNA: ENST00000568917.1

CNOT1-214, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-214ENST00000568917 RHOT2Q8IXI1 618 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 EFCAB13Q8IY85 973 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 SYCE1Q8N0S2 351 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 TTC39CQ8N584 583 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 OR5B17Q8NGF7 314 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 DNAJB3Q8WWF6 145 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 RFFLQ8WZ73 363 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 RPGRIP1Q96KN7 1286 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
CNOT1-214ENST00000568917 MTMR12Q9C0I1 747 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 NIF3L1Q9GZT8 377 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 FAM49AQ9H0Q0 323 aaPredicted RBP10.05□□□□□ -0.8
CNOT1-214ENST00000568917 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 DDX20Q9UHI6 824 aaKnown RBP10.05□□□□□ -0.8
CNOT1-214ENST00000568917 ITGA11Q9UKX5 1188 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 SAR1BQ9Y6B6 198 aa10.05□□□□□ -0.8
CNOT1-214ENST00000568917 MYH10P35580 1976 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 PDCD11Q14690 1871 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 MACROD2A1Z1Q3 448 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 MYADML2A6NDP7 307 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CES2O00748 559 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 FKTNO75072 461 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 RTN2O75298 545 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 TRPA1O75762 1119 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 P4HA1P13674 534 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 ACO1P21399 889 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 YARSP54577 528 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 TFAMQ00059 246 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CKAP4Q07065 602 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 TMEM132DQ14C87 1099 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 NBPF20Q3BBV1 942 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 SLC10A6Q3KNW5 377 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 SERINC5Q86VE9 423 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 RPUSD2Q8IZ73 545 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 UBR7Q8N806 425 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CEP120Q8N960 986 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 ZNF784Q8NCA9 323 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 RAET1EQ8TD07 263 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 U2AF1L4Q8WU68 220 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CTNNBL1Q8WYA6 563 aaPredicted RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 KAT5Q92993 513 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 TRIM11Q96F44 468 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 OSMRQ99650 979 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CELF4Q9BZC1 486 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 PRKD2Q9BZL6 878 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CYP3A43Q9HB55 503 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 APOBEC3GQ9HC16 384 aaKnown RBP10.04□□□□□ -0.8
CNOT1-214ENST00000568917 CHST12Q9NRB3 414 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 DUSP10Q9Y6W6 482 aa10.04□□□□□ -0.8
CNOT1-214ENST00000568917 LACTBL1A8MY62 500 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CYP26A1O43174 497 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
CNOT1-214ENST00000568917 SGPL1O95470 568 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 PGK1P00558 417 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CST3P01034 146 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-214ENST00000568917 ASGR1P07306 291 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 PNMA6AP0CW24 399 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-214ENST00000568917 MYBL1P10243 752 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 USP8P40818 1118 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 VEGFBP49765 207 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 ZNF132P52740 706 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 GALCP54803 685 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 MRPS6P82932 125 aaKnown RBP10.03□□□□□ -0.8
CNOT1-214ENST00000568917 FMO1Q01740 532 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 ZNF699Q32M78 642 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 MSS51Q4VC12 460 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 SEZ6Q53EL9 994 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 LMBRD2Q68DH5 695 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CXCL17Q6UXB2 119 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 SLFN11Q7Z7L1 901 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 SLC47A2Q86VL8 602 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 ANKLE1Q8NAG6 615 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CD99L2Q8TCZ2 262 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CPB2Q96IY4 423 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 VCPIP1Q96JH7 1222 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 ZNF668Q96K58 619 aaPredicted RBP10.03□□□□□ -0.8
CNOT1-214ENST00000568917 PI4K2AQ9BTU6 479 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 BCO2Q9BYV7 579 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 XYLT2Q9H1B5 865 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CNTN3Q9P232 1028 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 SNX12Q9UMY4 172 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 NUB1Q9Y5A7 615 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 TRPV2Q9Y5S1 764 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 SQORQ9Y6N5 450 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 CAPN6Q9Y6Q1 641 aa10.03□□□□□ -0.8
CNOT1-214ENST00000568917 FRMPD3Q5JV73 1810 aa10.02□□□□□ -0.8
CNOT1-214ENST00000568917 MTA2O94776 668 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 MOCS3O95396 460 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 NFICP08651 508 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 KRT5P13647 590 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 CHRNB2P17787 502 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 CCND3P30281 292 aaPredicted RBP10.02□□□□□ -0.81
CNOT1-214ENST00000568917 NAP1L1P55209 391 aaKnown RBP10.02□□□□□ -0.81
CNOT1-214ENST00000568917 MYL6P60660 151 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 GPC5P78333 572 aa10.02□□□□□ -0.81
CNOT1-214ENST00000568917 RBP5P82980 135 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms