RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 ZNF18P17022 549 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 ATICP31939 592 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 FMO5P49326 533 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 MYL6P60660 151 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 CAMK1Q14012 370 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 MAN2A1Q16706 1144 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 USP41Q3LFD5 358 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 DSTYKQ6XUX3 929 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 FAM200AQ8TCP9 573 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 TAS1R2Q8TE23 839 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 TUBGCP2Q9BSJ2 902 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 HERC2P3Q9BVR0 1158 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 TLR9Q9NR96 1032 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 CHST7Q9NS84 486 aa18.02■□□□□ 0.48
COMMD4-224ENST00000568877 M0QZQ0 153 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 PMM2O15305 246 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 N4BP1O75113 896 aaKnown RBP18.01■□□□□ 0.47
COMMD4-224ENST00000568877 CTSAP10619 480 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 CDK11BP21127 795 aaKnown RBP18.01■□□□□ 0.47
COMMD4-224ENST00000568877 PIK3CAP42336 1068 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 ERVFC1P60507 584 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 MYL7Q01449 175 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 PTPROQ16827 1216 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 SGSM1Q2NKQ1 1148 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.01■□□□□ 0.47
COMMD4-224ENST00000568877 Q7L0L9 218 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 TMC7Q7Z402 723 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 LUZP1Q86V48 1076 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 FBXL13Q8NEE6 735 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 SENP8Q96LD8 212 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 TCF25Q9BQ70 676 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 ZBP1Q9H171 429 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 XYLT2Q9H1B5 865 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 GDAP2Q9NXN4 497 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 PCDHB8Q9UN66 801 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 COQ4Q9Y3A0 265 aa18.01■□□□□ 0.47
COMMD4-224ENST00000568877 CYB561D2O14569 222 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 SYN3O14994 580 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 P4HA2O15460 535 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 PRKCSHP14314 528 aaPredicted RBP18■□□□□ 0.47
COMMD4-224ENST00000568877 FGFR3P22607 806 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 TKTP29401 623 aaKnown RBP18■□□□□ 0.47
COMMD4-224ENST00000568877 GLUD2P49448 558 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 CETN1Q12798 172 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 BMS1Q14692 1282 aaKnown RBP18■□□□□ 0.47
COMMD4-224ENST00000568877 KRT31Q15323 416 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 ZNF699Q32M78 642 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 VWA3BQ502W6 1294 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 PDE12Q6L8Q7 609 aaKnown RBP18■□□□□ 0.47
COMMD4-224ENST00000568877 KIAA1841Q6NSI8 718 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 CEP57Q86XR8 500 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 DEFB123Q8N688 67 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 ANKRD20A12PQ8NF67 263 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 MICAL1Q8TDZ2 1067 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 TAF4BQ92750 862 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 SEMA4DQ92854 862 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 MRPL38Q96DV4 380 aaKnown RBP18■□□□□ 0.47
COMMD4-224ENST00000568877 B3GALT6Q96L58 329 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 TTPALQ9BTX7 342 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 VRTNQ9H8Y1 702 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 NGRNQ9NPE2 291 aaKnown RBP18■□□□□ 0.47
COMMD4-224ENST00000568877 ENTPD7Q9NQZ7 604 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 RAB20Q9NX57 234 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 SNX9Q9Y5X1 595 aa18■□□□□ 0.47
COMMD4-224ENST00000568877 PLXNA4Q9HCM2 1894 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 ARHGEF37A1IGU5 675 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 FSCN2O14926 492 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 CSPG5O95196 566 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 CXCL14O95715 111 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 ASS1P00966 412 aaKnown RBP17.99■□□□□ 0.47
COMMD4-224ENST00000568877 URODP06132 367 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 ODC1P11926 461 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 IRS1P35568 1242 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 TPM4P67936 248 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 DSG1Q02413 1049 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
COMMD4-224ENST00000568877 WDR72Q3MJ13 1102 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 MIIPQ5JXC2 388 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 RTP2Q5QGT7 225 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 KIAA0319Q5VV43 1072 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 CCDC150Q8NCX0 1101 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 APPL2Q8NEU8 664 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 PI4K2AQ9BTU6 479 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 IMPG2Q9BZV3 1241 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 NDST4Q9H3R1 872 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 MRPL17Q9NRX2 175 aaKnown RBP17.99■□□□□ 0.47
COMMD4-224ENST00000568877 TAB2Q9NYJ8 693 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 LMCD1Q9NZU5 365 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 LIMA1Q9UHB6 759 aaKnown RBP17.99■□□□□ 0.47
COMMD4-224ENST00000568877 SSX2IPQ9Y2D8 614 aa17.99■□□□□ 0.47
COMMD4-224ENST00000568877 LRRC10BA6NIK2 292 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 GOLGA6L19H0YKK7 550 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 LILRB3O75022 631 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 CLSTN1O94985 981 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 TPM2P07951 284 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 ATP1A3P13637 1013 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 TYMPP19971 482 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 TNNC1P63316 161 aa17.98■□□□□ 0.47
COMMD4-224ENST00000568877 ADGRE1Q14246 886 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms