RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SMG9Q9H0W8 520 aaKnown RBP16.26■□□□□ 0.19
USB1-214ENST00000568848 GTSE1Q9NYZ3 720 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 RAB23Q9ULC3 237 aa16.26■□□□□ 0.19
USB1-214ENST00000568848 ANK1P16157 1881 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 MAN2B1O00754 1011 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 CXCL12P48061 93 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 TNK2Q07912 1038 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 PPP2R5AQ15172 486 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 SLC10A6Q3KNW5 377 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 LAIR1Q6GTX8 287 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
USB1-214ENST00000568848 TMC8Q8IU68 726 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 ZNF512Q96ME7 567 aaPredicted RBP16.25■□□□□ 0.19
USB1-214ENST00000568848 TCHPQ9BT92 498 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 LRRC3Q9BY71 257 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 ASAH2Q9NR71 780 aa16.25■□□□□ 0.19
USB1-214ENST00000568848 PHLPP2Q6ZVD8 1323 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 SLC30A4O14863 429 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 CXCL8P10145 99 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 CCR3P51677 355 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 EFNA5P52803 228 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 CACNB1Q02641 598 aaPredicted RBP16.24■□□□□ 0.19
USB1-214ENST00000568848 DUSP4Q13115 394 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 TRIM29Q14134 588 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 PON2Q15165 354 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 IL17AQ16552 155 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 TTC38Q5R3I4 469 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 ZNF280DQ6N043 979 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
USB1-214ENST00000568848 GPR161Q8N6U8 529 aaKnown RBP16.24■□□□□ 0.19
USB1-214ENST00000568848 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 STKLD1Q8NE28 680 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 SUSD3Q96L08 255 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 ACAP3Q96P50 834 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 PLIN2Q99541 437 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 MKNK1Q9BUB5 465 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 CNTN3Q9P232 1028 aa16.24■□□□□ 0.19
USB1-214ENST00000568848 NPHP3-ACAD11A0A0J9YXS1 232 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 ZNF197O14709 1029 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 SYN3O14994 580 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 EXTL3O43909 919 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 PRAMEF12O95522 483 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 RETP07949 1114 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 KCNE1P15382 129 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 PROZP22891 400 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 TNFSF9P41273 254 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 KPNA1P52294 538 aaPredicted RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 CYP4F8P98187 520 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 PTGDRQ13258 359 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 ZRSR1Q15695 479 aaKnown RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 NAIF1Q69YI7 327 aaPredicted RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 IQCEQ6IPM2 695 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 MFSD6LQ8IWD5 586 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 CCDC83Q8IWF9 413 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 CELF5Q8N6W0 485 aaKnown RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 ERMNQ8TAM6 284 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 SNX29Q8TEQ0 813 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 KIFAP3Q92845 792 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 CHAMP1Q96JM3 812 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 MRPL4Q9BYD3 311 aaKnown RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 KMT5AQ9NQR1 393 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 TOPORSQ9NS56 1045 aaPredicted RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 ARHGAP28Q9P2N2 729 aa16.23■□□□□ 0.19
USB1-214ENST00000568848 AFF4Q9UHB7 1163 aaKnown RBP16.23■□□□□ 0.19
USB1-214ENST00000568848 ASPMQ8IZT6 3477 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 SPECC1L-ADORA2AF8WAN1 911 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 H7C4K7 107 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 AXIN1O15169 862 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
USB1-214ENST00000568848 EPHA5P54756 1037 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 ARID3BQ8IVW6 561 aaPredicted RBP16.22■□□□□ 0.19
USB1-214ENST00000568848 YAF2Q8IY57 180 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 ELMOD1Q8N336 334 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 ATAD1Q8NBU5 361 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 NETO1Q8TDF5 533 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 CSGALNACT1Q8TDX6 532 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 LPIN3Q9BQK8 851 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 FAM126AQ9BYI3 521 aaPredicted RBP16.22■□□□□ 0.19
USB1-214ENST00000568848 PPP4R2Q9NY27 417 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 LRWD1Q9UFC0 647 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 PCDHB8Q9UN66 801 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 LAMA1P25391 3075 aa16.22■□□□□ 0.19
USB1-214ENST00000568848 MCF2P10911 925 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 SDHBP21912 280 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
USB1-214ENST00000568848 CTHP32929 405 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 NEK4P51957 841 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 TPGS2Q68CL5 300 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 GAREM2Q75VX8 874 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 RTL10Q7L3V2 364 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 DEPDC1BQ8WUY9 529 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 ARRDC1-AS1Q9H2J1 176 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 SLC38A7Q9NVC3 462 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 PCDHB6Q9Y5E3 794 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 TSC2P49815 1807 aa16.21■□□□□ 0.19
USB1-214ENST00000568848 EML5Q05BV3 1969 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 TOB1P50616 345 aaPredicted RBP16.2■□□□□ 0.18
USB1-214ENST00000568848 NRLP54845 237 aa16.2■□□□□ 0.18
USB1-214ENST00000568848 DMP1Q13316 513 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms