RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 TRIM74Q86UV6 250 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 TRIM73Q86UV7 250 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 ATP11CQ8NB49 1132 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 HSPH1Q92598 858 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 FAM81BQ96LP2 452 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 CNBD2Q96M20 576 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 KIFC3Q9BVG8 833 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 MIS12Q9H081 205 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 CHD2O14647 1828 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 UBAP1LF5GYI3 381 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 XPO1O14980 1071 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 TBX10O75333 385 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 FOSP01100 380 aaPredicted RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 GCLCP48506 637 aaPredicted RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 NFIXQ14938 502 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 ACAP1Q15027 740 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 KRT80Q6KB66 452 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 C11orf63Q6NUN7 778 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 WDR75Q8IWA0 830 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 INPP5DQ92835 1189 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 DNAJC1Q96KC8 554 aaKnown RBP11.49□□□□□ -0.57
PALB2-206ENST00000568219 SENP7Q9BQF6 1050 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 TEKT3Q9BXF9 490 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 SENP1Q9P0U3 644 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 FIS1Q9Y3D6 152 aa11.49□□□□□ -0.57
PALB2-206ENST00000568219 MYH15Q9Y2K3 1946 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 TESPA1A2RU30 521 aaPredicted RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 WDR64B1ANS9 1081 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 NTSR2O95665 410 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 POLR2MP0CAP2 368 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 PTGIRP43119 386 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 PTK7Q13308 1070 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 ACSBG2Q5FVE4 666 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 CLNKQ7Z7G1 428 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 ZNF384Q8TF68 577 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 RBM41Q96IZ5 413 aaKnown RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 CLMNQ96JQ2 1002 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 SLC4A9Q96Q91 983 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 LXNQ9BS40 222 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 TOPORSQ9NS56 1045 aaPredicted RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 UVRAGQ9P2Y5 699 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 MTO1Q9Y2Z2 717 aaKnown RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 STARD13Q9Y3M8 1113 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 RNF8O76064 485 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 AQP5P55064 265 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 FASTKD3Q14CZ7 662 aaKnown RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 MAP7D1Q3KQU3 841 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 KCTD21Q4G0X4 260 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 SCARA5Q6ZMJ2 495 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 TTC7BQ86TV6 843 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 DTNBP1Q96EV8 351 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 TMEM206Q9H813 350 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 HSPBP1Q9NZL4 362 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 HEY1Q9Y5J3 304 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 BTNL10A8MVZ5 291 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 CYP11B1P15538 503 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 SH3BGRP55822 239 aaPredicted RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 CHI3L2Q15782 390 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 KCNT1Q5JUK3 1230 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 TCHHL1Q5QJ38 904 aaPredicted RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 ATG16L1Q676U5 607 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 CDCA2Q69YH5 1023 aaPredicted RBP11.48□□□□□ -0.57
PALB2-206ENST00000568219 KRT39Q6A163 491 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 HAUS6Q7Z4H7 955 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 KCTD6Q8NC69 237 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 USP6NLQ92738 828 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 ATP2A3Q93084 1043 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 ANKRD27Q96NW4 1050 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 GCNAQ96QF7 691 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 GTF3C4Q9UKN8 822 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 PCDHA3Q9Y5H8 950 aa11.48□□□□□ -0.57
PALB2-206ENST00000568219 TMEM94Q12767 1356 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 GSC2O15499 205 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 KRT37O76014 449 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 PYGBP11216 843 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 LIG4P49917 911 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 GEMIN4P57678 1058 aaKnown RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 PARP6Q2NL67 630 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 CBWD2Q8IUF1 395 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 FAF2Q96CS3 445 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ATXN7L3BQ96GX2 97 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 FAM20AQ96MK3 541 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 CADM1Q9BY67 442 aaKnown RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 SMYD2Q9NRG4 433 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 E7ENQ6 273 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 LIN7AO14910 233 aaPredicted RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 MSH4O15457 936 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 EDF1O60869 148 aaKnown RBP11.47□□□□□ -0.57
PALB2-206ENST00000568219 STAM2O75886 525 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 DGKIO75912 1065 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 SLC12A3P55017 1021 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 TRPC3Q13507 836 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 CDO1Q16878 200 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 FAXCQ5TGI0 409 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 ZCCHC23Q6ZST2 131 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 SLFN11Q7Z7L1 901 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 RNF148Q8N7C7 305 aa11.47□□□□□ -0.57
PALB2-206ENST00000568219 PAFAH2Q99487 392 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms