RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 SPTLC1O15269 473 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 EIF3DO15371 548 aaKnown RBP eCLIP27.27■■□□□ 1.96
FANCA-228ENST00000567943 CCL16O15467 120 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 GARTP22102 1010 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 NTHL1P78549 312 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 TMEM132DQ14C87 1099 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 C9orf57Q5W0N0 161 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 EPM2AIP1Q7L775 607 aaPredicted RBP27.27■■□□□ 1.96
FANCA-228ENST00000567943 GRASPQ7Z6J2 395 aaPredicted RBP27.27■■□□□ 1.96
FANCA-228ENST00000567943 CBWD1Q9BRT8 395 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 FAM213AQ9BRX8 229 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 DERAQ9Y315 318 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 TIMM13Q9Y5L4 95 aaPredicted RBP27.27■■□□□ 1.96
FANCA-228ENST00000567943 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.27■■□□□ 1.96
FANCA-228ENST00000567943 MUC6Q6W4X9 2439 aa27.27■■□□□ 1.96
FANCA-228ENST00000567943 ANO9A1A5B4 782 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 PIRO00625 290 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 LILRA4P59901 499 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 POU5F1Q01860 360 aaKnown RBP27.26■■□□□ 1.95
FANCA-228ENST00000567943 MTMR3Q13615 1198 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 UVSSAQ2YD98 709 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 ARMCX5Q6P1M9 558 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 EFCAB13Q8IY85 973 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 ZNF507Q8TCN5 953 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 GOLPH3LQ9H4A5 285 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 PCIF1Q9H4Z3 704 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 KCNK12Q9HB15 430 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 EPS15L1Q9UBC2 864 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 C2CD2Q9Y426 696 aa27.26■■□□□ 1.95
FANCA-228ENST00000567943 GOLGA8IPA6NC78 632 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 GOLGA8JA6NMD2 632 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 H7C4K7 107 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 POU2F2P09086 479 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 ARPP19P56211 112 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 CTXN3Q4LDR2 81 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 APPL2Q8NEU8 664 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 BEST2Q8NFU1 509 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 NOC3LQ8WTT2 800 aaKnown RBP27.25■■□□□ 1.95
FANCA-228ENST00000567943 SLC39A2Q9NP94 309 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 HCFC1R1Q9NWW0 138 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 KMT2EQ8IZD2 1858 aa27.25■■□□□ 1.95
FANCA-228ENST00000567943 TULP1O00294 542 aaPredicted RBP27.24■■□□□ 1.95
FANCA-228ENST00000567943 KLRC4O43908 158 aa27.24■■□□□ 1.95
FANCA-228ENST00000567943 OAZ2O95190 189 aa27.24■■□□□ 1.95
FANCA-228ENST00000567943 SEC24AO95486 1093 aa27.24■■□□□ 1.95
FANCA-228ENST00000567943 LDHAP00338 332 aaKnown RBP27.24■■□□□ 1.95
FANCA-228ENST00000567943 ATF2P15336 505 aa27.24■■□□□ 1.95
FANCA-228ENST00000567943 GBP2P32456 591 aaPredicted RBP27.24■■□□□ 1.95
FANCA-228ENST00000567943 GET4Q7L5D6 327 aaPredicted RBP27.24■■□□□ 1.95
FANCA-228ENST00000567943 UBALD2Q8IYN6 164 aa27.24■■□□□ 1.95
FANCA-228ENST00000567943 PBXIP1Q96AQ6 731 aa27.24■■□□□ 1.95
FANCA-228ENST00000567943 ARHGEF37A1IGU5 675 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 PDGFBP01127 241 aaPredicted RBP27.23■■□□□ 1.95
FANCA-228ENST00000567943 ZNF280DQ6N043 979 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 RTL10Q7L3V2 364 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 NELFCDQ8IXH7 590 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 SCFD1Q8WVM8 642 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 RSAD2Q8WXG1 361 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 EXOC1Q9NV70 894 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 DNMT3BQ9UBC3 853 aaKnown RBP27.23■■□□□ 1.95
FANCA-228ENST00000567943 HCN4Q9Y3Q4 1203 aa27.23■■□□□ 1.95
FANCA-228ENST00000567943 UBE4BO95155 1302 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 EXTL3O43909 919 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 IL18RAPO95256 599 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 VNN2O95498 520 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 LAMP2P13473 410 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 YWHAHQ04917 246 aaPredicted RBP27.22■■□□□ 1.95
FANCA-228ENST00000567943 SCARA3Q6AZY7 606 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 BRSK2Q8IWQ3 736 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 TCEAL8Q8IYN2 117 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 FAM84AQ96KN4 292 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 SENP8Q96LD8 212 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 DPP3Q9NY33 737 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 RBAKQ9NYW8 714 aaPredicted RBP27.22■■□□□ 1.95
FANCA-228ENST00000567943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.22■■□□□ 1.95
FANCA-228ENST00000567943 POLIQ9UNA4 740 aa27.22■■□□□ 1.95
FANCA-228ENST00000567943 GOLGA6L4A6NEF3 574 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 ZNF202O95125 648 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 MYL1P05976 194 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 FSHRP23945 695 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 KMT5BQ4FZB7 885 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 TPGS2Q68CL5 300 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 KRBA2Q6ZNG9 492 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 GPD1LQ8N335 351 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 ITFG1Q8TB96 612 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 MFSD14AQ96MC6 490 aa27.21■■□□□ 1.95
FANCA-228ENST00000567943 KIAA0391O15091 583 aaKnown RBP27.2■■□□□ 1.94
FANCA-228ENST00000567943 TGFB1I1O43294 461 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 XYLBO75191 536 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 PRR29P0C7W0 189 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 TYMPP19971 482 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 TDGQ13569 410 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 POTEHQ6S545 545 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 DSTYKQ6XUX3 929 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 RNF19BQ6ZMZ0 732 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 ST13P5Q8NFI4 369 aaPredicted RBP27.2■■□□□ 1.94
FANCA-228ENST00000567943 BORCS6Q96GS4 357 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 CYP4F11Q9HBI6 524 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 AGPAT3Q9NRZ7 376 aa27.2■■□□□ 1.94
FANCA-228ENST00000567943 IGSF9Q9P2J2 1179 aa27.2■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms