RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 BARX2Q9UMQ3 279 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-220ENST00000567720 PCDHB8Q9UN66 801 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 SSX2IPQ9Y2D8 614 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 TCF20Q9UGU0 1960 aaKnown RBP18.58■□□□□ 0.56
COMMD4-220ENST00000567720 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-220ENST00000567720 FSD2A1L4K1 749 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 ADAM12O43184 909 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 TNNC2P02585 160 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 EPCAMP16422 314 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 KCNA5P22460 613 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 RPL13P26373 211 aaKnown RBP18.57■□□□□ 0.56
COMMD4-220ENST00000567720 NDUFV1P49821 464 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 CLCN4P51793 760 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 CLDN10P78369 228 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 PAK1Q13153 545 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 DUOXA2Q1HG44 320 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 C1orf220Q5T0J3 134 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 GLYCTKQ8IVS8 523 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 DUSP9Q99956 384 aaKnown RBP18.57■□□□□ 0.56
COMMD4-220ENST00000567720 MKNK1Q9BUB5 465 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 CLEC1BQ9P126 229 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 FNIP2Q9P278 1114 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 COG5Q9UP83 839 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 AGAP1Q9UPQ3 857 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 PTPRDP23468 1912 aa18.57■□□□□ 0.56
COMMD4-220ENST00000567720 H3BQ06 376 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-220ENST00000567720 SLC16A3O15427 465 aaKnown RBP18.56■□□□□ 0.56
COMMD4-220ENST00000567720 NCK2O43639 380 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 ADH1AP07327 375 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 KRT19P08727 400 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 TRIM49P0CI25 452 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 TRIM49CP0CI26 452 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 PSMC2P35998 433 aaKnown RBP18.56■□□□□ 0.56
COMMD4-220ENST00000567720 CREMQ03060 361 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 BFSP1Q12934 665 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 DPCR1Q3MIW9 517 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 SV2CQ496J9 727 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 TDRD10Q5VZ19 366 aaKnown RBP18.56■□□□□ 0.56
COMMD4-220ENST00000567720 RSPO2Q6UXX9 243 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-220ENST00000567720 EP400NLQ6ZTU2 488 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 TRAPPC11Q7Z392 1133 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 CSGALNACT2Q8N6G5 542 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 LRRC52Q8N7C0 313 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 TMC2Q8TDI7 906 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 SLC22A17Q8WUG5 538 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 BORCS6Q96GS4 357 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 SENP8Q96LD8 212 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 CLSTN3Q9BQT9 956 aa18.56■□□□□ 0.56
COMMD4-220ENST00000567720 TIMM13Q9Y5L4 95 aaPredicted RBP18.56■□□□□ 0.56
COMMD4-220ENST00000567720 CETN3O15182 167 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 ODC1P11926 461 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 KLRC2P26717 231 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 PNPLA4P41247 253 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 STX17P56962 302 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 FKBP3Q00688 224 aaKnown RBP18.55■□□□□ 0.56
COMMD4-220ENST00000567720 MRPL58Q14197 206 aaKnown RBP18.55■□□□□ 0.56
COMMD4-220ENST00000567720 PDXDC1Q6P996 788 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 FOXR2Q6PJQ5 311 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 DSTYKQ6XUX3 929 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 ANKS3Q6ZW76 656 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 INTS8Q75QN2 995 aaKnown RBP18.55■□□□□ 0.56
COMMD4-220ENST00000567720 MSLNLQ96KJ4 702 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 MED15Q96RN5 788 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 CDY1Q9Y6F8 540 aa18.55■□□□□ 0.56
COMMD4-220ENST00000567720 DOCK6Q96HP0 2047 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 KPNA7A9QM74 516 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 TBC1D4O60343 1298 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 EPB41P11171 864 aaKnown RBP18.54■□□□□ 0.56
COMMD4-220ENST00000567720 TYMPP19971 482 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 VAMP7P51809 220 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 RBP5P82980 135 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 CLUL1Q15846 466 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 ZNF280DQ6N043 979 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 TMEM184AQ6ZMB5 413 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.54■□□□□ 0.56
COMMD4-220ENST00000567720 APPL2Q8NEU8 664 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 TMEM63CQ9P1W3 806 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 BACE2Q9Y5Z0 518 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 A0A0C4DFX4 3053 aa18.54■□□□□ 0.56
COMMD4-220ENST00000567720 BICDL2A1A5D9 508 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 TGM5O43548 720 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 VNN1O95497 513 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 GLUD1P00367 558 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 C4BPAP04003 597 aaKnown RBP18.53■□□□□ 0.56
COMMD4-220ENST00000567720 CYP11A1P05108 521 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 KRT13P13646 458 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 PAX3P23760 479 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 NLRP12P59046 1061 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 YWHAHQ04917 246 aaPredicted RBP18.53■□□□□ 0.56
COMMD4-220ENST00000567720 ENPEPQ07075 957 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 ZACNQ401N2 412 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 CCDC183Q5T5S1 534 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 C15orf39Q6ZRI6 1047 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 PPFIBP1Q86W92 1011 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 CASP10Q92851 521 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 MAN1C1Q9NR34 630 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 FBXL5Q9UKA1 691 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 L1RE1Q9UN81 338 aa18.53■□□□□ 0.56
COMMD4-220ENST00000567720 CYB561D2O14569 222 aa18.52■□□□□ 0.56
COMMD4-220ENST00000567720 CST3P01034 146 aaPredicted RBP18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms