RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 C18orf25Q96B23 403 aaPredicted RBP12.13□□□□□ -0.47
CDH3-206ENST00000567674 C7orf25Q9BPX7 421 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 RTP3Q9BQQ7 232 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 GOLGA2P5Q9HBQ8 144 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 SLC2A4RGQ9NR83 387 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 TECTAO75443 2155 aa12.13□□□□□ -0.47
CDH3-206ENST00000567674 WDR27A2RRH5 827 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 SOBPA7XYQ1 873 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 H0Y858 1186 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 GCNT3O95395 438 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 LRG1P02750 347 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 HARSP12081 509 aaKnown RBP12.12□□□□□ -0.47
CDH3-206ENST00000567674 ADSSP30520 456 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
CDH3-206ENST00000567674 NBL1P41271 181 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 BRCC3P46736 316 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
CDH3-206ENST00000567674 CTXN3Q4LDR2 81 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 ZC2HC1CQ53FD0 456 aaPredicted RBP12.12□□□□□ -0.47
CDH3-206ENST00000567674 IQCEQ6IPM2 695 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 PHLDB3Q6NSJ2 640 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 DPH6Q7L8W6 267 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 SLC44A3Q8N4M1 653 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 LRRC52Q8N7C0 313 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 SLC7A14Q8TBB6 771 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 ZNF560Q96MR9 790 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 TBC1D7Q9P0N9 293 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 CACNG4Q9UBN1 327 aa12.12□□□□□ -0.47
CDH3-206ENST00000567674 CACNA1GO43497 2377 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 TRIP11Q15643 1979 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 PLXNA3P51805 1871 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 ANKRD63C9JTQ0 380 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 EXTL3O43909 919 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 N4BP1O75113 896 aaKnown RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 PRPF40AO75400 957 aaKnown RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 ECI2O75521 394 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 WEE2P0C1S8 567 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 SPATA31D3P0C874 917 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 IDEP14735 1019 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 TNFSF9P41273 254 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 TUFMP49411 452 aaKnown RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 TAF6P49848 677 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 EPHA5P54756 1037 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 PFKPQ01813 784 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 EHHADHQ08426 723 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 PSMD2Q13200 908 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 SV2CQ496J9 727 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 PABPC1LQ4VXU2 614 aaKnown RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 CYP4A22Q5TCH4 519 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 C9orf57Q5W0N0 161 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 JADE1Q6IE81 842 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 CRELD2Q6UXH1 353 aaPredicted RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 DSTYKQ6XUX3 929 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 SPATA31D4Q6ZUB0 917 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 GRASPQ7Z6J2 395 aaPredicted RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 METTL23Q86XA0 190 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 BRSK2Q8IWQ3 736 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 SYCP3Q8IZU3 236 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 THEM5Q8N1Q8 247 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 TMEM86AQ8N2M4 240 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 GOLGA5Q8TBA6 731 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 E2F7Q96AV8 911 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 SHDQ96IW2 340 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 CEP295NLQ96MC4 621 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 ZNF512Q96ME7 567 aaPredicted RBP12.11□□□□□ -0.47
CDH3-206ENST00000567674 TRPV5Q9NQA5 729 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 TUBGCP4Q9UGJ1 667 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 ITGA11Q9UKX5 1188 aa12.11□□□□□ -0.47
CDH3-206ENST00000567674 PDCD11Q14690 1871 aaKnown RBP12.1□□□□□ -0.47
CDH3-206ENST00000567674 VWA8A3KMH1 1905 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 A0A087X0B3 334 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 ZNF233A6NK53 670 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 PRRG1O14668 218 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 ADAM12O43184 909 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 SLFN14P0C7P3 912 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 CMA1P23946 247 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 WEE1P30291 646 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 ACOT2P49753 483 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 MLLT6P55198 1093 aaPredicted RBP12.1□□□□□ -0.47
CDH3-206ENST00000567674 HTR4Q13639 388 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 OVOS1Q6IE37 1185 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 EPM2AIP1Q7L775 607 aaPredicted RBP12.1□□□□□ -0.47
CDH3-206ENST00000567674 FGF13Q92913 245 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 CCDC34Q96HJ3 373 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 MYADMQ96S97 322 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 OSBPL6Q9BZF3 934 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
CDH3-206ENST00000567674 TRPV4Q9HBA0 871 aa12.1□□□□□ -0.47
CDH3-206ENST00000567674 CYP4F11Q9HBI6 524 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms