RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 MKNK1Q9BUB5 465 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 TRIP11Q15643 1979 aa16.34■□□□□ 0.21
COMMD4-219ENST00000567399 LRRIQ3A6PVS8 624 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 TEX28O15482 410 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 LINC01565O15544 149 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 EFEMP2O95967 443 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 RPL17P18621 184 aaKnown RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 KCNA5P22460 613 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 ARPP19P56211 112 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 YWHAHQ04917 246 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 ADAM15Q13444 863 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 CTXN3Q4LDR2 81 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 VARS2Q5ST30 1063 aaKnown RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 TCERG1LQ5VWI1 586 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 GPR65Q8IYL9 337 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 LRRC52Q8N7C0 313 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 LNX1Q8TBB1 728 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 CASP10Q92851 521 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 HPDLQ96IR7 371 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 UBE2ZQ9H832 354 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 RXFP1Q9HBX9 757 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 PRDM6Q9NQX0 595 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 FNIP2Q9P278 1114 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 THEGQ9P2T0 379 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 TIMM13Q9Y5L4 95 aaPredicted RBP16.33■□□□□ 0.2
COMMD4-219ENST00000567399 PTPRJQ12913 1337 aa16.33■□□□□ 0.2
COMMD4-219ENST00000567399 M0QZQ0 153 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 SLC16A3O15427 465 aaKnown RBP16.32■□□□□ 0.2
COMMD4-219ENST00000567399 STX10O60499 249 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 HUS1O60921 280 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 LILRB3O75022 631 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 GLUD1P00367 558 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 DLG4P78352 724 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 PDCD11Q14690 1871 aaKnown RBP16.32■□□□□ 0.2
COMMD4-219ENST00000567399 AAK1Q2M2I8 961 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 DCAF17Q5H9S7 520 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-219ENST00000567399 ZNF280DQ6N043 979 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 CAVIN1Q6NZI2 390 aaKnown RBP16.32■□□□□ 0.2
COMMD4-219ENST00000567399 FILIP1Q7Z7B0 1213 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 THEM5Q8N1Q8 247 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 ZNF516Q92618 1163 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 CEP63Q96MT8 703 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 METTL14Q9HCE5 456 aaKnown RBP16.32■□□□□ 0.2
COMMD4-219ENST00000567399 ARMCX3Q9UH62 379 aaPredicted RBP16.32■□□□□ 0.2
COMMD4-219ENST00000567399 DPP7Q9UHL4 492 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 RWDD2AQ9UIY3 292 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 DSEQ9UL01 958 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 SNX9Q9Y5X1 595 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
COMMD4-219ENST00000567399 IKBKBO14920 756 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 SPTLC1O15269 473 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 TRIM49P0CI25 452 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 TRIM49CP0CI26 452 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 OR1D2P34982 312 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 CLUL1Q15846 466 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 OVOS1Q6IE37 1185 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 TTI2Q6NXR4 508 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 CCDC150Q8NCX0 1101 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 PLEKHO2Q8TD55 490 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 MMS19Q96T76 1030 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 SRRTQ9BXP5 876 aaKnown RBP16.31■□□□□ 0.2
COMMD4-219ENST00000567399 MTRRQ9UBK8 725 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 SIX4Q9UIU6 781 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 BARX2Q9UMQ3 279 aaPredicted RBP16.31■□□□□ 0.2
COMMD4-219ENST00000567399 BACE2Q9Y5Z0 518 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 CDY1Q9Y6F8 540 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 MYO9BQ13459 2157 aa16.31■□□□□ 0.2
COMMD4-219ENST00000567399 CHD9Q3L8U1 2897 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 H3BQ06 376 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-219ENST00000567399 SLC34A2O95436 690 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 GNA14O95837 355 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 CST3P01034 146 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-219ENST00000567399 SPATA31D3P0C874 917 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 EPCAMP16422 314 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 TYMPP19971 482 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 PIK3CAP42336 1068 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 GCLMP48507 274 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 AARSP49588 968 aaKnown RBP eCLIP16.3■□□□□ 0.2
COMMD4-219ENST00000567399 CLCN4P51793 760 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 TNNC1P63316 161 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 RBM10P98175 930 aaKnown RBP16.3■□□□□ 0.2
COMMD4-219ENST00000567399 DPCR1Q3MIW9 517 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 SPATA31D4Q6ZUB0 917 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 DUSP9Q99956 384 aaKnown RBP16.3■□□□□ 0.2
COMMD4-219ENST00000567399 CLSTN3Q9BQT9 956 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
COMMD4-219ENST00000567399 ANO10Q9NW15 660 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 ANK1P16157 1881 aa16.3■□□□□ 0.2
COMMD4-219ENST00000567399 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.29■□□□□ 0.2
COMMD4-219ENST00000567399 C4BPAP04003 597 aaKnown RBP16.29■□□□□ 0.2
COMMD4-219ENST00000567399 CCDC192P0DO97 292 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 CPB1P15086 417 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 ATICP31939 592 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 ELF1P32519 619 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 MYL6P60660 151 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 CLDN10P78369 228 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 MRPS5P82675 430 aaKnown RBP16.29■□□□□ 0.2
COMMD4-219ENST00000567399 TFF2Q03403 129 aa16.29■□□□□ 0.2
COMMD4-219ENST00000567399 ENPEPQ07075 957 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms