RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 UBL4BQ8N7F7 174 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 AENQ8WTP8 325 aaKnown RBP24.82■■□□□ 1.56
LINC00543-201ENST00000567234 FAXDC2Q96IV6 333 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 ANKRD36BP1Q96IX9 119 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 KRT12Q99456 494 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 FDXACB1Q9BRP7 624 aaPredicted RBP24.82■■□□□ 1.56
LINC00543-201ENST00000567234 WNT8AQ9H1J5 351 aa24.82■■□□□ 1.56
LINC00543-201ENST00000567234 RPF1Q9H9Y2 349 aaKnown RBP24.82■■□□□ 1.56
LINC00543-201ENST00000567234 GOLGA6BA6NDN3 693 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 TNNC2P02585 160 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 TMEM191BP0C7N4 346 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 ZNF132P52740 706 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 RNASE9P60153 205 aaKnown RBP24.81■■□□□ 1.56
LINC00543-201ENST00000567234 MAP2K5Q13163 448 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 NNTQ13423 1086 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 PTPROQ16827 1216 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 EMC10Q5UCC4 262 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 TMEM270Q6UE05 265 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 MICALCLQ6ZW33 695 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 MCOLN2Q8IZK6 566 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 RBBP8NLQ8NC74 664 aaPredicted RBP24.81■■□□□ 1.56
LINC00543-201ENST00000567234 CAPS2Q9BXY5 557 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 GDF3Q9NR23 364 aa24.81■■□□□ 1.56
LINC00543-201ENST00000567234 RRN3P2A6NIE6 340 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 CA12O43570 354 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 SLC7A5Q01650 507 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 TRPC3Q13507 836 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 GRIK4Q16099 956 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 PPP2R5EQ16537 467 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 ZNF410Q86VK4 478 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 C1orf131Q8NDD1 294 aaKnown RBP24.8■■□□□ 1.56
LINC00543-201ENST00000567234 FAM212AQ96EL1 285 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 VCPIP1Q96JH7 1222 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 ZNF668Q96K58 619 aaPredicted RBP24.8■■□□□ 1.56
LINC00543-201ENST00000567234 NIF3L1Q9GZT8 377 aa24.8■■□□□ 1.56
LINC00543-201ENST00000567234 CNOT8Q9UFF9 292 aaKnown RBP24.8■■□□□ 1.56
LINC00543-201ENST00000567234 CLGNO14967 610 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 CTGFP29279 349 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 GNA15P30679 374 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 UMODL1Q5DID0 1318 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 KRIT1O00522 736 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 FSBPO95073 299 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 MYBL2P10244 700 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 MAP2K2P36507 400 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 GGCXP38435 758 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 EPHB4P54760 987 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 MYL6P60660 151 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 TFAMQ00059 246 aaKnown RBP24.79■■□□□ 1.56
LINC00543-201ENST00000567234 MESDQ14696 234 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 MARCH8Q5T0T0 291 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 DCAF12L1Q5VU92 463 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 EMBQ6PCB8 327 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 EIF1ADQ8N9N8 165 aaKnown RBP24.79■■□□□ 1.56
LINC00543-201ENST00000567234 CD101Q93033 1021 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 ZSWIM1Q9BR11 485 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 SLITRK6Q9H5Y7 841 aa24.79■■□□□ 1.56
LINC00543-201ENST00000567234 A6NJR5 290 aa24.78■■□□□ 1.56
LINC00543-201ENST00000567234 GPR25O00155 361 aa24.78■■□□□ 1.56
LINC00543-201ENST00000567234 HEXIM1O94992 359 aaKnown RBP24.78■■□□□ 1.56
LINC00543-201ENST00000567234 COMTP21964 271 aa24.78■■□□□ 1.56
LINC00543-201ENST00000567234 HNRNPH1P31943 449 aaKnown RBP24.78■■□□□ 1.56
LINC00543-201ENST00000567234 NSFP46459 744 aaKnown RBP24.78■■□□□ 1.56
LINC00543-201ENST00000567234 CDC42EP1Q00587 391 aa24.78■■□□□ 1.56
LINC00543-201ENST00000567234 RNPC3Q96LT9 517 aaKnown RBP24.78■■□□□ 1.56
LINC00543-201ENST00000567234 PDZD7Q9H5P4 517 aa24.78■■□□□ 1.56
LINC00543-201ENST00000567234 DONSONQ9NYP3 566 aa24.78■■□□□ 1.56
LINC00543-201ENST00000567234 AGPSO00116 658 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 ATMINO43313 823 aaPredicted RBP24.77■■□□□ 1.56
LINC00543-201ENST00000567234 VTNP04004 478 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 CTNNA2P26232 953 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 YWHAEP62258 255 aaKnown RBP24.77■■□□□ 1.56
LINC00543-201ENST00000567234 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP24.77■■□□□ 1.56
LINC00543-201ENST00000567234 CXorf56Q9H5V9 222 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 ASB7Q9H672 318 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 GLI1P08151 1106 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 HSPA6P17066 643 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 VEGFBP49765 207 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 MON1BQ7L1V2 547 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 PHF13Q86YI8 300 aaPredicted RBP24.77■■□□□ 1.56
LINC00543-201ENST00000567234 KIAA0319LQ8IZA0 1049 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 CEP120Q8N960 986 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 ALG3Q92685 438 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 XYLT2Q9H1B5 865 aa24.77■■□□□ 1.56
LINC00543-201ENST00000567234 GNEQ9Y223 722 aaKnown RBP24.77■■□□□ 1.56
LINC00543-201ENST00000567234 RAD51CO43502 376 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 FGGP02679 453 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 STAG3L1P0CL83 205 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 CXCL8P10145 99 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 PSEN1P49768 467 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 PEX5P50542 639 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 NOMO3P69849 1222 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 ZNF699Q32M78 642 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 LIN9Q5TKA1 542 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 NAA35Q5VZE5 725 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 KLHL7Q8IXQ5 586 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 NLRP7Q8WX94 980 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 CAVIN3Q969G5 261 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 CYFIP2Q96F07 1278 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 CABS1Q96KC9 395 aa24.76■■□□□ 1.55
LINC00543-201ENST00000567234 CITO14578 2027 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms