RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 KLF15Q9UIH9 416 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 KPNA7A9QM74 516 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 EIF3HO15372 352 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH13-209ENST00000567109 JAK2O60674 1132 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 GFAPP14136 432 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 ADORA2BP29275 332 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 CPT1AP50416 773 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 HSD17B4P51659 736 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 MRPS15P82914 257 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 CDK17Q00537 523 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 AGBL2Q5U5Z8 902 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 CENPPQ6IPU0 288 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PPP1R14BQ96C90 147 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 SAMSN1Q9NSI8 373 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 MTMR4Q9NYA4 1195 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 USE1Q9NZ43 259 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 GPRC5DQ9NZD1 345 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 CELF2O95319 508 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 HIST1H2AGP0C0S8 130 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 BRAFP15056 766 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 HIST1H2ADP20671 130 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 GCLCP48506 637 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 SYCP2LQ5T4T6 812 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 C16orf87Q6PH81 154 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PDIK1LQ8N165 341 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 NSUN7Q8NE18 718 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 MCPH1Q8NEM0 835 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 ASAP3Q8TDY4 903 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 NSUN6Q8TEA1 469 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 HIST1H2AHQ96KK5 128 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 HIST1H2AJQ99878 128 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 H2AFJQ9BTM1 129 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 EPN3Q9H201 632 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 ADA2Q9NZK5 511 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 ATP8A1Q9Y2Q0 1164 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 SYNGAP1Q96PV0 1343 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 MANSC4A6NHS7 340 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 PLA2G4BP0C869 781 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 NPY2RP49146 381 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 KPNA1P52294 538 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 HIRAP54198 1017 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 TRIP13Q15645 432 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 HEATR6Q6AI08 1181 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 KDELC2Q7Z4H8 507 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 ZSCAN18Q8TBC5 510 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 UCMAQ8WVF2 138 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PLEKHA8Q96JA3 519 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 DEPDC7Q96QD5 511 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 BCL2L14Q9BZR8 327 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PCDHB9Q9Y5E1 797 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 POTEB3A0JP26 581 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 HMBSP08397 361 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 GUCY1A2P33402 732 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 MAPK9P45984 424 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 KLC1Q07866 573 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 IFT88Q13099 833 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 UBE2SQ16763 222 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 POTEBQ6S5H4 581 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 DIS3LQ8TF46 1054 aaKnown RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 CCDC3Q9BQI4 270 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PFASO15067 1338 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 ENC1O14682 589 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 FAM107AO95990 144 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PFKFB1P16118 471 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 IGFBP4P22692 258 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 FCGRTP55899 365 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 PPATQ06203 517 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 CYP4A22Q5TCH4 519 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 LDHDQ86WU2 507 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 AGGF1Q8N302 714 aaeCLIP6.53□□□□□ -1.36
CDH13-209ENST00000567109 RIBC1Q8N443 379 aaPredicted RBP6.53□□□□□ -1.36
CDH13-209ENST00000567109 MAGEC3Q8TD91 643 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 KIAA1586Q9HCI6 787 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 RNF146Q9NTX7 359 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 NEDD4P46934 1319 aa6.53□□□□□ -1.36
CDH13-209ENST00000567109 LIN7AO14910 233 aaPredicted RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 PPP1R37O75864 691 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 ENO2P09104 434 aaPredicted RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 GTF2E2P29084 291 aaKnown RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 SSTR3P32745 418 aaPredicted RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 STAT3P40763 770 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 PSMC5P62195 406 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 ALDH6A1Q02252 535 aaKnown RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 SPP2Q13103 211 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 ME3Q16798 604 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 CEP55Q53EZ4 464 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 ITPRIPL1Q6GPH6 555 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 DDX42Q86XP3 938 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH13-209ENST00000567109 TERB1Q8NA31 727 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 GMCL1P1Q8NEA9 526 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 PIGOQ8TEQ8 1089 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 PRMT6Q96LA8 375 aaPredicted RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 FMO2Q99518 471 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 KIAA1683Q9H0B3 1180 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 FAM217BQ9NTX9 383 aaPredicted RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 WARS2Q9UGM6 360 aaKnown RBP6.52□□□□□ -1.37
CDH13-209ENST00000567109 SLC39A10Q9ULF5 831 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 GOLGA8MH3BSY2 632 aa6.52□□□□□ -1.37
CDH13-209ENST00000567109 NDUFS3O75489 264 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms