RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 HSPA4P34932 840 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 ARPP19P56211 112 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 ROR1Q01973 937 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 TNK2Q07912 1038 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 PSMD2Q13200 908 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 BYSLQ13895 437 aaKnown RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 SPDYCQ5MJ68 293 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 ANO7Q6IWH7 933 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 ARID3BQ8IVW6 561 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 BPIFB1Q8TDL5 484 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 SLC7A3Q8WY07 619 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 BAP1Q92560 729 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 RSPRY1Q96DX4 576 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 MS4A3Q96HJ5 214 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 PI4K2AQ9BTU6 479 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 DNAAF2Q9NVR5 837 aaKnown RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 KLK14Q9P0G3 267 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 ATXN2Q99700 1313 aaKnown RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 ATMQ13315 3056 aa10.72□□□□□ -0.69
CAPN3-216ENST00000567071 TNRC6BQ9UPQ9 1833 aaKnown RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 NUP210Q8TEM1 1887 aaPredicted RBP10.72□□□□□ -0.69
CAPN3-216ENST00000567071 IGLV3-22A0A075B6J6 115 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 ENO4A6NNW6 628 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 ARHGAP33O14559 1287 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 SLC27A2O14975 620 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 CHMP2AO43633 222 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 MOSPD3O75425 235 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 THP07101 528 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 CALM1P0DP23 149 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 CALM2P0DP24 149 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 CALM3P0DP25 149 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 HLA-EP13747 358 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 MCM2P49736 904 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 EPHA5P54756 1037 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 UGCGQ16739 394 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 ARHGAP15Q53QZ3 475 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 TPGS2Q68CL5 300 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 PPP1R18Q6NYC8 613 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 TTC30AQ86WT1 665 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 GSTCDQ8NEC7 633 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 SHKBP1Q8TBC3 707 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 WBP1Q96G27 269 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 CPB2Q96IY4 423 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 CNOT6LQ96LI5 555 aaKnown RBP10.71□□□□□ -0.69
CAPN3-216ENST00000567071 MINDY3Q9H8M7 445 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 TMEM74BQ9NUR3 256 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 NXF1Q9UBU9 619 aaKnown RBP10.71□□□□□ -0.69
CAPN3-216ENST00000567071 TAF6LQ9Y6J9 622 aa10.71□□□□□ -0.69
CAPN3-216ENST00000567071 MGAQ8IWI9 3026 aa10.71□□□□□ -0.7
CAPN3-216ENST00000567071 KNTC1P50748 2209 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 hCG_1642624A0A1W2PR95 340 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 A0A1W2PRU2 124 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 DDX11L8A8MPP1 907 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 ASAP2O43150 1006 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 EPB41L2O43491 1005 aaKnown RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 ABLIM3O94929 683 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 PLEKHA8P1O95397 391 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 PRKCBP05771 671 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 CYP21A2P08686 494 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 IL12RB1P42701 662 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 PTGER3P43115 390 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 VASPP50552 380 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 CLCN6P51797 869 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 TWF1Q12792 350 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 NECTIN1Q15223 517 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 RNF20Q5VTR2 975 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 SLC8B1Q6J4K2 584 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 GLRX5Q86SX6 157 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 SLCO6A1Q86UG4 719 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 GPIHBP1Q8IV16 184 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 ZNF654Q8IZM8 581 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 SRBD1Q8N5C6 995 aaKnown RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 RNF149Q8NC42 400 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 PRPF31Q8WWY3 499 aaKnown RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 NXPE2Q96DL1 559 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 DDX27Q96GQ7 796 aaKnown RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 P2RY13Q9BPV8 354 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 SH2D3AQ9BRG2 576 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 SENP2Q9HC62 589 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 FSCN3Q9NQT6 498 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 PILRBQ9UKJ0 227 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 SNX14Q9Y5W7 946 aa10.7□□□□□ -0.7
CAPN3-216ENST00000567071 UBR5O95071 2799 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 MUC22E2RYF6 1773 aaPredicted RBP10.7□□□□□ -0.7
CAPN3-216ENST00000567071 H7C4K7 107 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 INO80B-WBP1J3KQ70 363 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 AP5Z1O43299 807 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 TSPAN1O60635 241 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 GAS7O60861 476 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 B3GAT3O94766 335 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 FGF19O95750 216 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 CYP3A4P08684 503 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 C6P13671 934 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 ITPKAP23677 461 aa10.69□□□□□ -0.7
CAPN3-216ENST00000567071 TKTP29401 623 aaKnown RBP10.69□□□□□ -0.7
CAPN3-216ENST00000567071 EIF2S3P41091 472 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms