RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 CLEC16AQ2KHT3 1053 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 TRMT10CQ7L0Y3 403 aaKnown RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 NIPA1Q7RTP0 329 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 KLF6Q99612 283 aaPredicted RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 NIF3L1Q9GZT8 377 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 FGFR1OP2Q9NVK5 253 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 MAP3K20Q9NYL2 800 aaKnown RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 NUB1Q9Y5A7 615 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 M0QZ92 97 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 MAP2K2P36507 400 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 IFI35P80217 286 aaPredicted RBP12.25□□□□□ -0.45
CDH1-210ENST00000566612 KIF22Q14807 665 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 RCOR2Q8IZ40 523 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 MCOLN2Q8IZK6 566 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 SPIRE2Q8WWL2 714 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 SEMA4DQ92854 862 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 SNX9Q9Y5X1 595 aa12.25□□□□□ -0.45
CDH1-210ENST00000566612 A0A0G2JND7 137 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 FRMD3A2A2Y4 597 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 MAPTP10636 758 aaKnown RBP12.24□□□□□ -0.45
CDH1-210ENST00000566612 PDGFRAP16234 1089 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 PTPRAP18433 802 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 NAMPTP43490 491 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 FNTAP49354 379 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 C11orf63Q6NUN7 778 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 PPM1NQ8N819 430 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 CHST13Q8NET6 341 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 SCFD2Q8WU76 684 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 CDC42EP4Q9H3Q1 356 aaKnown RBP12.24□□□□□ -0.45
CDH1-210ENST00000566612 NR2E1Q9Y466 385 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 MYH3P11055 1940 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 KLRG2A4D1S0 409 aaPredicted RBP12.24□□□□□ -0.45
CDH1-210ENST00000566612 ADORA2BP29275 332 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 SDC4P31431 198 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 RFC5P40937 340 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 MAGEA4P43358 317 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 RASSF2P50749 326 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 BCAR1P56945 870 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 EIF3EP60228 445 aaKnown RBP12.24□□□□□ -0.45
CDH1-210ENST00000566612 EMC1Q8N766 993 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 SLC16A10Q8TF71 515 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 CHST7Q9NS84 486 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 FAM49BQ9NUQ9 324 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 MYH7P12883 1935 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 CDH16O75309 829 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 HIF1AQ16665 826 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 IER5Q5VY09 327 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 SLC9A9Q8IVB4 645 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 FBXO16Q8IX29 292 aaPredicted RBP12.24□□□□□ -0.45
CDH1-210ENST00000566612 LRRC34Q8IZ02 419 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 TTC13Q8NBP0 860 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 ATP2A3Q93084 1043 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 HES6Q96HZ4 224 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 MBOAT7Q96N66 472 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 DDX23Q9BUQ8 820 aaKnown RBP12.24□□□□□ -0.45
CDH1-210ENST00000566612 LRRC4Q9HBW1 653 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 SYNPO2Q9UMS6 1093 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 COMMD10Q9Y6G5 202 aa12.24□□□□□ -0.45
CDH1-210ENST00000566612 TJP1Q07157 1748 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 AGPSO00116 658 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 HOXD13P35453 343 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 ARL4AP40617 200 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 RAP1GAPP47736 663 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 RCN2Q14257 317 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 TRIM68Q6AZZ1 485 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 ZNF677Q86XU0 584 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PCDHB18PQ96TA0 734 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 CISHQ9NSE2 258 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 HAUS2Q9NVX0 235 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 MYO5AQ9Y4I1 1855 aaKnown RBP12.23□□□□□ -0.45
CDH1-210ENST00000566612 CES2O00748 559 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 OGTO15294 1046 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 SHBGP04278 402 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 ITGB3P05106 788 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 RARGP13631 454 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PTGER2P43116 358 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 AP3M2P53677 418 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 TFDP2Q14188 446 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 IQCKQ8N0W5 287 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PRELID2Q8N945 189 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 ZNF606Q8WXB4 792 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 KREMEN1Q96MU8 473 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 SMARCAD1Q9H4L7 1026 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 DHX35Q9H5Z1 703 aaKnown RBP12.23□□□□□ -0.45
CDH1-210ENST00000566612 ERVK-5Q9HDB9 667 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 SLC5A4Q9NY91 659 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
CDH1-210ENST00000566612 NWD2Q9ULI1 1742 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 TOM1L1O75674 476 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PROSCO94903 275 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 ARL1P40616 181 aaPredicted RBP12.23□□□□□ -0.45
CDH1-210ENST00000566612 FMO1Q01740 532 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 FAM71AQ8IYT1 594 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 DNAAF3Q8N9W5 541 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PPP1R12CQ9BZL4 782 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 TRABDQ9H4I3 376 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 PCDHA3Q9Y5H8 950 aa12.23□□□□□ -0.45
CDH1-210ENST00000566612 A8MXQ7 604 aa12.22□□□□□ -0.45
CDH1-210ENST00000566612 HSD17B4P51659 736 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms