RNA–Protein interactions for RNA: ENST00000566600.1

NME3-209, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-209ENST00000566600 NDUFV1P49821 464 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 PMS1P54277 932 aaKnown RBP28.18■■■□□ 2.1
NME3-209ENST00000566600 PRSS55Q6UWB4 352 aaPredicted RBP28.18■■■□□ 2.1
NME3-209ENST00000566600 EP400NLQ6ZTU2 488 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 TRAPPC11Q7Z392 1133 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 GZF1Q9H116 711 aaPredicted RBP28.18■■■□□ 2.1
NME3-209ENST00000566600 UBE2ZQ9H832 354 aaPredicted RBP28.18■■■□□ 2.1
NME3-209ENST00000566600 CTNND2Q9UQB3 1225 aa28.18■■■□□ 2.1
NME3-209ENST00000566600 LRRIQ3A6PVS8 624 aaPredicted RBP28.17■■■□□ 2.1
NME3-209ENST00000566600 ODC1P11926 461 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 VAMP7P51809 220 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 MYO1EQ12965 1108 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 TMEM184AQ6ZMB5 413 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 CXorf38Q8TB03 319 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 PLEKHO2Q8TD55 490 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 SENP8Q96LD8 212 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 CEP63Q96MT8 703 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 THEGQ9P2T0 379 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 DACH1Q9UI36 760 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 SIX4Q9UIU6 781 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 BACE2Q9Y5Z0 518 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 REV3LO60673 3130 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 COL6A3P12111 3177 aa28.17■■■□□ 2.1
NME3-209ENST00000566600 VWA8A3KMH1 1905 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 KPNA7A9QM74 516 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 SPTLC1O15269 473 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 TYMPP19971 482 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 BFSP1Q12934 665 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 VARS2Q5ST30 1063 aaKnown RBP28.16■■■□□ 2.1
NME3-209ENST00000566600 CCDC183Q5T5S1 534 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 TTI2Q6NXR4 508 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 RBM43Q6ZSC3 357 aaKnown RBP28.16■■■□□ 2.1
NME3-209ENST00000566600 CASP10Q92851 521 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 OXCT2Q9BYC2 517 aaPredicted RBP28.16■■■□□ 2.1
NME3-209ENST00000566600 MTRRQ9UBK8 725 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 DSEQ9UL01 958 aa28.16■■■□□ 2.1
NME3-209ENST00000566600 LINC01565O15544 149 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 NLRP12P59046 1061 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 KCNC3Q14003 757 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 AAK1Q2M2I8 961 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 ELMSAN1Q6PJG2 1045 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 ZNF516Q92618 1163 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 FAM84AQ96KN4 292 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 DPP7Q9UHL4 492 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 RWDD2AQ9UIY3 292 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 HCFC2Q9Y5Z7 792 aa28.15■■■□□ 2.1
NME3-209ENST00000566600 PHACTR2O75167 634 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 CLCN4P51793 760 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 MCCD1P59942 119 aaPredicted RBP28.14■■■□□ 2.1
NME3-209ENST00000566600 YWHAHQ04917 246 aaPredicted RBP28.14■■■□□ 2.1
NME3-209ENST00000566600 BIRC3Q13489 604 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 TRPC3Q13507 836 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 MRPL58Q14197 206 aaKnown RBP28.14■■■□□ 2.1
NME3-209ENST00000566600 ZNF280DQ6N043 979 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 LLGL2Q6P1M3 1020 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 SLC22A17Q8WUG5 538 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 SYAP1Q96A49 352 aaPredicted RBP28.14■■■□□ 2.1
NME3-209ENST00000566600 EEF2KMTQ96G04 330 aa28.14■■■□□ 2.1
NME3-209ENST00000566600 DUSP9Q99956 384 aaKnown RBP28.14■■■□□ 2.1
NME3-209ENST00000566600 SCN1AP35498 2009 aa28.14■■■□□ 2.09
NME3-209ENST00000566600 EYSQ5T1H1 3165 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 CYB561D2O14569 222 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 STX10O60499 249 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 OAZ2O95190 189 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 FGFR1OPO95684 399 aaKnown RBP28.13■■■□□ 2.09
NME3-209ENST00000566600 GLP2RO95838 553 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 GLUD1P00367 558 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 RPL17P18621 184 aaKnown RBP28.13■■■□□ 2.09
NME3-209ENST00000566600 KCNA5P22460 613 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 DLG4P78352 724 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 FILIP1Q7Z7B0 1213 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 METTL23Q86XA0 190 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 VN1R2Q8NFZ6 395 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 BORCS6Q96GS4 357 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 HPDLQ96IR7 371 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 CLSTN3Q9BQT9 956 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 METTL14Q9HCE5 456 aaKnown RBP28.13■■■□□ 2.09
NME3-209ENST00000566600 PRDM6Q9NQX0 595 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 DZANK1Q9NVP4 752 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 GDAP2Q9NXN4 497 aa28.13■■■□□ 2.09
NME3-209ENST00000566600 C4BPAP04003 597 aaKnown RBP28.12■■■□□ 2.09
NME3-209ENST00000566600 CYP11A1P05108 521 aa28.12■■■□□ 2.09
NME3-209ENST00000566600 LTBRP36941 435 aa28.12■■■□□ 2.09
NME3-209ENST00000566600 STX17P56962 302 aa28.12■■■□□ 2.09
NME3-209ENST00000566600 CTXN3Q4LDR2 81 aa28.12■■■□□ 2.09
NME3-209ENST00000566600 CT47A1Q5JQC4 288 aaPredicted RBP28.12■■■□□ 2.09
NME3-209ENST00000566600 OVOS1Q6IE37 1185 aa28.12■■■□□ 2.09
NME3-209ENST00000566600 ATXN2LQ8WWM7 1075 aaKnown RBP28.12■■■□□ 2.09
NME3-209ENST00000566600 ARMCX3Q9UH62 379 aaPredicted RBP28.12■■■□□ 2.09
NME3-209ENST00000566600 CDY1Q9Y6F8 540 aa28.12■■■□□ 2.09
NME3-209ENST00000566600 HUS1O60921 280 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 TBX10O75333 385 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 HOXB8P17481 243 aaPredicted RBP28.11■■■□□ 2.09
NME3-209ENST00000566600 ATICP31939 592 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 GTF2H1P32780 548 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 RAB33AQ14088 237 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 TDRD10Q5VZ19 366 aaKnown RBP28.11■■■□□ 2.09
NME3-209ENST00000566600 SLC8B1Q6J4K2 584 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 FRMD5Q7Z6J6 570 aa28.11■■■□□ 2.09
NME3-209ENST00000566600 GLYCTKQ8IVS8 523 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms