RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 UMODL1Q5DID0 1318 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 PSTPIP1O43586 416 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 ZC3H11AO75152 810 aaKnown RBP eCLIP15.1■□□□□ 0.01
CDH1-209ENST00000566510 ANP32DO95626 131 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 HARSP12081 509 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 ETS1P14921 441 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 CLNS1AP54105 237 aaKnown RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 GALNTL6Q49A17 601 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 MIS18BP1Q6P0N0 1132 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 PPP1R21Q6ZMI0 780 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 GLIS1Q8NBF1 620 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 ATP6V0A1Q93050 837 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 FHDC1Q9C0D6 1143 aaPredicted RBP15.1■□□□□ 0.01
CDH1-209ENST00000566510 DNPEPQ9ULA0 475 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 NEU2Q9Y3R4 380 aa15.1■□□□□ 0.01
CDH1-209ENST00000566510 CYP1A1P04798 512 aaPredicted RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 GARTP22102 1010 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 FOXN2P32314 431 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 DNAJC3Q13217 504 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 ZNF268Q14587 947 aaPredicted RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 RPAINQ86UA6 219 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 ACSF2Q96CM8 615 aaPredicted RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 PLCD4Q9BRC7 762 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 VPS37BQ9H9H4 285 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 ATP6V0A4Q9HBG4 840 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 AGO2Q9UKV8 859 aaKnown RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 FAM47DPA6NHR8 397 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 EXTL3O43909 919 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 ZBED4O75132 1171 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 ECM2O94769 699 aaPredicted RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 TCF4P15884 667 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 HMGB2P26583 209 aaKnown RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 ARSEP51690 589 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 RPL7AP62424 266 aaKnown RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 NFX1Q12986 1120 aaKnown RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 MKRN3Q13064 507 aaKnown RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 GPS1Q13098 491 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 SEZ6Q53EL9 994 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 CGB2Q6NT52 195 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 TAS1R3Q7RTX0 852 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 C4orf33Q8N1A6 199 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 NSMCE1Q8WV22 266 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 ZBTB45Q96K62 511 aaPredicted RBP15.09■□□□□ 0.01
CDH1-209ENST00000566510 KIF9Q9HAQ2 790 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 PTPRJQ12913 1337 aa15.09■□□□□ 0.01
CDH1-209ENST00000566510 DOCK5Q9H7D0 1870 aa15.08■□□□□ 0
CDH1-209ENST00000566510 TCEA3O75764 348 aa15.08■□□□□ 0
CDH1-209ENST00000566510 DGAT1O75907 488 aa15.08■□□□□ 0
CDH1-209ENST00000566510 IFNB1P01574 187 aa15.08■□□□□ 0
CDH1-209ENST00000566510 NR3C2P08235 984 aa15.08■□□□□ 0
CDH1-209ENST00000566510 TAC1P20366 129 aa15.08■□□□□ 0
CDH1-209ENST00000566510 MGAT5Q09328 741 aa15.08■□□□□ 0
CDH1-209ENST00000566510 RIPK1Q13546 671 aa15.08■□□□□ 0
CDH1-209ENST00000566510 MTMR2Q13614 643 aa15.08■□□□□ 0
CDH1-209ENST00000566510 CUL2Q13617 745 aa15.08■□□□□ 0
CDH1-209ENST00000566510 FASTKD3Q14CZ7 662 aaKnown RBP15.08■□□□□ 0
CDH1-209ENST00000566510 MTFR1Q15390 333 aa15.08■□□□□ 0
CDH1-209ENST00000566510 ZACNQ401N2 412 aa15.08■□□□□ 0
CDH1-209ENST00000566510 TMEM63BQ5T3F8 832 aa15.08■□□□□ 0
CDH1-209ENST00000566510 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.08■□□□□ 0
CDH1-209ENST00000566510 KATNAL2Q8IYT4 538 aa15.08■□□□□ 0
CDH1-209ENST00000566510 ABRAQ8N0Z2 381 aa15.08■□□□□ 0
CDH1-209ENST00000566510 SAMD3Q8N6K7 520 aa15.08■□□□□ 0
CDH1-209ENST00000566510 MCPH1Q8NEM0 835 aa15.08■□□□□ 0
CDH1-209ENST00000566510 SPOCK2Q92563 424 aa15.08■□□□□ 0
CDH1-209ENST00000566510 TMEM143Q96AN5 459 aa15.08■□□□□ 0
CDH1-209ENST00000566510 RSRC1Q96IZ7 334 aaKnown RBP15.08■□□□□ 0
CDH1-209ENST00000566510 WNK4Q96J92 1243 aa15.08■□□□□ 0
CDH1-209ENST00000566510 CFAP57Q96MR6 1250 aa15.08■□□□□ 0
CDH1-209ENST00000566510 C17orf75Q9HAS0 396 aa15.08■□□□□ 0
CDH1-209ENST00000566510 ETNK1Q9HBU6 452 aa15.08■□□□□ 0
CDH1-209ENST00000566510 LGALS13Q9UHV8 139 aa15.08■□□□□ 0
CDH1-209ENST00000566510 RIPK3Q9Y572 518 aa15.08■□□□□ 0
CDH1-209ENST00000566510 MYH9P35579 1960 aaKnown RBP15.08■□□□□ 0
CDH1-209ENST00000566510 GOLGA8SH3BPF8 625 aa15.08■□□□□ 0
CDH1-209ENST00000566510 GOLGA8MH3BSY2 632 aa15.08■□□□□ 0
CDH1-209ENST00000566510 KRT1P04264 644 aa15.08■□□□□ 0
CDH1-209ENST00000566510 MSH2P43246 934 aa15.08■□□□□ 0
CDH1-209ENST00000566510 NOMO3P69849 1222 aa15.08■□□□□ 0
CDH1-209ENST00000566510 PRKCEQ02156 737 aa15.08■□□□□ 0
CDH1-209ENST00000566510 NAA25Q14CX7 972 aa15.08■□□□□ 0
CDH1-209ENST00000566510 ECHDC2Q86YB7 292 aa15.08■□□□□ 0
CDH1-209ENST00000566510 ZCCHC9Q8N567 271 aaKnown RBP15.08■□□□□ 0
CDH1-209ENST00000566510 RBBP8NLQ8NC74 664 aaPredicted RBP15.08■□□□□ 0
CDH1-209ENST00000566510 EXD1Q8NHP7 514 aa15.08■□□□□ 0
CDH1-209ENST00000566510 LPAR1Q92633 364 aa15.08■□□□□ 0
CDH1-209ENST00000566510 SENP7Q9BQF6 1050 aa15.08■□□□□ 0
CDH1-209ENST00000566510 RPAP3Q9H6T3 665 aaPredicted RBP15.08■□□□□ 0
CDH1-209ENST00000566510 XPNPEP1Q9NQW7 623 aa15.08■□□□□ 0
CDH1-209ENST00000566510 CYP26B1Q9NR63 512 aa15.08■□□□□ 0
CDH1-209ENST00000566510 RBAKQ9NYW8 714 aaPredicted RBP15.08■□□□□ 0
CDH1-209ENST00000566510 PRKAG3Q9UGI9 489 aa15.08■□□□□ 0
CDH1-209ENST00000566510 BRWD3Q6RI45 1802 aa15.07■□□□□ 0
CDH1-209ENST00000566510 KIAA1217Q5T5P2 1943 aa15.07■□□□□ 0
CDH1-209ENST00000566510 LRRIQ4A6NIV6 560 aa15.07■□□□□ 0
CDH1-209ENST00000566510 PSAPP07602 524 aa15.07■□□□□ 0
CDH1-209ENST00000566510 KLRC2P26717 231 aa15.07■□□□□ 0
CDH1-209ENST00000566510 CCND2P30279 289 aa15.07■□□□□ 0
CDH1-209ENST00000566510 POLGP54098 1239 aaPredicted RBP15.07■□□□□ 0
CDH1-209ENST00000566510 WDR4P57081 412 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms