RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 TRIP12Q14669 1992 aaPredicted RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CTAGE15A4D2H0 777 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 MYADML2A6NDP7 307 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 PALMO75781 387 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 FTLP02792 175 aaPredicted RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 PAEPP09466 180 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 FAM163BP0C2L3 166 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CTAGE8P0CG41 777 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 P4HA1P13674 534 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 KCNE1P15382 129 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CYP3A5P20815 502 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CDH5P33151 784 aaPredicted RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 USP8P40818 1118 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 ASPAP45381 313 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 RBP5P82980 135 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 TFAMQ00059 246 aaKnown RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 TMEM132DQ14C87 1099 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 ZNF699Q32M78 642 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 NBPF20Q3BBV1 942 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 ZNF667Q5HYK9 610 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 JADE1Q6IE81 842 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CTAGE6Q86UF2 777 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 PALB2Q86YC2 1186 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CTAGE4Q8IX94 777 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 TMEM192Q8IY95 271 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 LRRC52Q8N7C0 313 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 RBBP8NLQ8NC74 664 aaPredicted RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 DNAJB3Q8WWF6 145 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 RUBCNQ92622 972 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 CPB2Q96IY4 423 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 ZNF668Q96K58 619 aaPredicted RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 PBKQ96KB5 322 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 RPS6KC1Q96S38 1066 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 OSBPL9Q96SU4 736 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 OSMRQ99650 979 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 TRAIPQ9BWF2 469 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 ZNF518BQ9C0D4 1074 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 FAM49AQ9H0Q0 323 aaPredicted RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 DDX20Q9UHI6 824 aaKnown RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 STXBP5LQ9Y2K9 1186 aa9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 PDCD11Q14690 1871 aaKnown RBP9.48□□□□□ -0.89
LSM3P5-201ENST00000566307 MOXD2PA6NHM9 499 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 M0QZ92 97 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 ENC1O14682 589 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 XPOTO43592 962 aaKnown RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 BUB1O43683 1085 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 NPTXRO95502 500 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 MMEP08473 750 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 NFICP08651 508 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 KRT5P13647 590 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 NAP1L1P55209 391 aaKnown RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 CAP1Q01518 475 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 MGAT3Q09327 533 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 INCA1Q0VD86 236 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 CLUL1Q15846 466 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 FAM26DQ5JW98 314 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 UBXN11Q5T124 520 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 SPOPLQ6IQ16 392 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 PHF13Q86YI8 300 aaPredicted RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 CREG2Q8IUH2 290 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 MSANTD4Q8NCY6 345 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 SLC35G2Q8TBE7 412 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 ARID3AQ99856 593 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 FAM117AQ9C073 453 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 SENP6Q9GZR1 1112 aaPredicted RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 THAP2Q9H0W7 228 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 CDHR5Q9HBB8 845 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 TAS2R14Q9NYV8 317 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 TTC7AQ9ULT0 858 aaPredicted RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 UBQLN1Q9UMX0 589 aaKnown RBP9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 PCDHB4Q9Y5E5 795 aa9.47□□□□□ -0.89
LSM3P5-201ENST00000566307 C2orf72A6NCS6 295 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 MIF4GDA9UHW6 222 aaKnown RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 FKTNO75072 461 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 CSDE1O75534 798 aaKnown RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 KIF4AO95239 1232 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 PGK1P00558 417 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 CD4P01730 458 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 ASGR1P07306 291 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 CCND3P30281 292 aaPredicted RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 GNA15P30679 374 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 PNPLA4P41247 253 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 NOP2P46087 812 aaKnown RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 GSCP56915 257 aaPredicted RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 NOMO3P69849 1222 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 PTK7Q13308 1070 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 RPS6KA1Q15418 735 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 GDF6Q6KF10 455 aaPredicted RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 TMEM270Q6UE05 265 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 CXCL17Q6UXB2 119 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 RNF180Q86T96 592 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 NT5DC3Q86UY8 548 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 FAM228AQ86W67 206 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 CDR2LQ86X02 465 aaPredicted RBP9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 MCOLN2Q8IZK6 566 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 RASGEF1CQ8N431 466 aa9.46□□□□□ -0.9
LSM3P5-201ENST00000566307 MMGT1Q8N4V1 131 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms