RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	VNN1	O95497	513 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	HLA-DRA	P01903	254 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CHRNA1	P02708	482 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	FTL	P02792	175 aa	Predicted RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	SRGAP2C	P0DJJ0	459 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CSF2RA	P15509	400 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	TNNI1	P19237	187 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	MCM3	P25205	808 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	MATR3	P43243	847 aa	Known RBP eCLIP	10.87	□□□□□ -0.67	5e-7	■■■■■ 29.7
TCF4-231	ENST00000566279	GPNMB	Q14956	572 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	ENOSF1	Q7L5Y1	443 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	PEX26	Q7Z412	305 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	DEFB128	Q7Z7B8	93 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	DAAM2	Q86T65	1068 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	RHPN2	Q8IUC4	686 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	EXOC8	Q8IYI6	725 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	RNF149	Q8NC42	400 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	HDAC7	Q8WUI4	952 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	TMEM40	Q8WWA1	233 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	DDX1	Q92499	740 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CGRRF1	Q99675	332 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	LRRC1	Q9BTT6	524 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	MRPL4	Q9BYD3	311 aa	Known RBP	10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	C1orf112	Q9NSG2	853 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	PRKAG2	Q9UGJ0	569 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	CDY2A	Q9Y6F7	541 aa		10.87	□□□□□ -0.67
TCF4-231	ENST00000566279	SMIM35	A0A1B0GVV1	85 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	ABLIM1	O14639	778 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	KIAA0355	O15063	1070 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	TIMP1	P01033	207 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	PRKCB	P05771	671 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	MME	P08473	750 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	ACR	P10323	421 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	HARS	P12081	509 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	GZMA	P12544	262 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	PIK3CA	P42336	1068 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	EPHB4	P54760	987 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	CDR2	Q01850	454 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	TCEAL1	Q15170	157 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	SEZ6	Q53EL9	994 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	CCDC70	Q6NSX1	233 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	LRRC8D	Q7L1W4	858 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	ZBTB8OS	Q8IWT0	167 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	HES6	Q96HZ4	224 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	PBK	Q96KB5	322 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	NLRP4	Q96MN2	994 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	OSMR	Q99650	979 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	ACO2	Q99798	780 aa	Known RBP	10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	UBXN6	Q9BZV1	441 aa		10.86	□□□□□ -0.67
TCF4-231	ENST00000566279	CLDN3	O15551	220 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	NBN	O60934	754 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	RTN2	O75298	545 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	TOM1L1	O75674	476 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	IQCF3	P0C7M6	154 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	FGFR4	P22455	802 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	PDE6C	P51160	858 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	HADHB	P55084	474 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	MRPS25	P82663	173 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	BIRC3	Q13489	604 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	MAPK6	Q16659	721 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	TCTN1	Q2MV58	587 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	TAF2	Q6P1X5	1199 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	HDX	Q7Z353	690 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	BRSK2	Q8IWQ3	736 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	OR5B17	Q8NGF7	314 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	RUBCN	Q92622	972 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	VWCE	Q96DN2	955 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	FAM81B	Q96LP2	452 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	JPH2	Q9BR39	696 aa	Predicted RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	C2orf40	Q9H1Z8	148 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	APOBEC3G	Q9HC16	384 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	DMGDH	Q9UI17	866 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	ANK1	P16157	1881 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	TET1	Q8NFU7	2136 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	LAMA3	Q16787	3333 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	MAGEB2	O15479	319 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	MYBL2	P10244	700 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	GHR	P10912	638 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	KRT5	P13647	590 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	SELP	P16109	830 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	TNFSF9	P41273	254 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	RNASE9	P60153	205 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	GPC5	P78333	572 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	MRPS6	P82932	125 aa	Known RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	MGAT3	Q09327	533 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	WDR44	Q5JSH3	913 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	SPOPL	Q6IQ16	392 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	ZBTB33	Q86T24	672 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	RHOT2	Q8IXI1	618 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	USP38	Q8NB14	1042 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	ACTRT1	Q8TDG2	376 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	SEZ6L	Q9BYH1	1024 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	ST7	Q9NRC1	585 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	TMEM59L	Q9UK28	342 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279	AMFR	Q9UKV5	643 aa		10.85	□□□□□ -0.67
TCF4-231	ENST00000566279		A0A087WZ62	844 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	PITPNM1	O00562	1244 aa		10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	DDX3Y	O15523	660 aa	Known RBP	10.84	□□□□□ -0.67
TCF4-231	ENST00000566279	CEP104	O60308	925 aa		10.84	□□□□□ -0.67

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