RNA–Protein interactions for RNA: ENST00000566249.5

KARS-206, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-206ENST00000566249 SPATS1Q496A3 300 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 CHST15Q7LFX5 561 aaPredicted RBP7.07□□□□□ -1.28
KARS-206ENST00000566249 SRGAP1Q7Z6B7 1085 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 PPP1R3BQ86XI6 285 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 KIAA0319LQ8IZA0 1049 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 TBC1D15Q8TC07 691 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 BRIX1Q8TDN6 353 aaKnown RBP7.07□□□□□ -1.28
KARS-206ENST00000566249 TNPO1Q92973 898 aaKnown RBP7.07□□□□□ -1.28
KARS-206ENST00000566249 NT5C1BQ96P26 610 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 MRPL46Q9H2W6 279 aaKnown RBP7.07□□□□□ -1.28
KARS-206ENST00000566249 JKAMPQ9P055 326 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 CPA4Q9UI42 421 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 TESMINQ9Y4I5 508 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 UHRF1BP1Q6BDS2 1440 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 FER1L4A9Z1Z3 1794 aa7.07□□□□□ -1.28
KARS-206ENST00000566249 PTTG1IPP53801 180 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 RNASE9P60153 205 aaKnown RBP7.06□□□□□ -1.28
KARS-206ENST00000566249 GALEQ14376 348 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 CDSNQ15517 529 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 UTP14CQ5TAP6 766 aaKnown RBP7.06□□□□□ -1.28
KARS-206ENST00000566249 CCDC149Q6ZUS6 474 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 ZNF365Q70YC5 407 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 TMPRSS6Q8IU80 811 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 REXO4Q9GZR2 422 aaKnown RBP7.06□□□□□ -1.28
KARS-206ENST00000566249 SARS2Q9NP81 518 aaKnown RBP7.06□□□□□ -1.28
KARS-206ENST00000566249 AURKAIP1Q9NWT8 199 aaPredicted RBP7.06□□□□□ -1.28
KARS-206ENST00000566249 SLC45A2Q9UMX9 530 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 PCDHA6Q9UN73 950 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 SORCS3Q9UPU3 1222 aa7.06□□□□□ -1.28
KARS-206ENST00000566249 TPP1O14773 563 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 AGFG2O95081 481 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 PRSS23O95084 383 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 ZBED1O96006 694 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 AHSGP02765 367 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 PHKA1P46020 1223 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 GPSM2P81274 684 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 CNN3Q15417 329 aaKnown RBP7.05□□□□□ -1.28
KARS-206ENST00000566249 USP39Q53GS9 565 aaKnown RBP7.05□□□□□ -1.28
KARS-206ENST00000566249 KHDC1LQ5JSQ8 128 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 SPDYAQ5MJ70 313 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 METRNLQ641Q3 311 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 COL23A1Q86Y22 540 aaPredicted RBP7.05□□□□□ -1.28
KARS-206ENST00000566249 AOPEPQ8N6M6 819 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 FAM156AQ8NDB6 213 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 DCLRE1CQ96SD1 692 aaKnown RBP7.05□□□□□ -1.28
KARS-206ENST00000566249 C1QTNF3Q9BXJ4 246 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 BRD9Q9H8M2 597 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 CNNM1Q9NRU3 951 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 CFAP97Q9P2B7 532 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 L1RE1Q9UN81 338 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 TSC22D4Q9Y3Q8 395 aa7.05□□□□□ -1.28
KARS-206ENST00000566249 USP15Q9Y4E8 981 aaPredicted RBP7.05□□□□□ -1.28
KARS-206ENST00000566249 IQGAP2Q13576 1575 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 AKNAQ7Z591 1439 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 GRXCR1A8MXD5 290 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 TRIM24O15164 1050 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 TOM1O60784 492 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 CAND2O75155 1236 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 RECQL4O94761 1208 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 SCAF4O95104 1147 aaKnown RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 MATN4O95460 622 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 GJB1P08034 283 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 PSMC1P62191 440 aaKnown RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 HLTFQ14527 1009 aaKnown RBP eCLIP7.04□□□□□ -1.28
KARS-206ENST00000566249 NRN1LQ496H8 165 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 FAM102AQ5T9C2 384 aaPredicted RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 TSHZ3Q63HK5 1081 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 SWSAP1Q6NVH7 229 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 MAEAQ7L5Y9 396 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 PRRT2Q7Z6L0 340 aaPredicted RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 C1orf210Q8IVY1 113 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 ZFPM1Q8IX07 1006 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 CCAR1Q8IX12 1150 aaKnown RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 RHOT2Q8IXI1 618 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 CELF5Q8N6W0 485 aaKnown RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 IL17DQ8TAD2 202 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 CPT1CQ8TCG5 803 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 EXTL1Q92935 676 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 NEU1Q99519 415 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 ZMAT3Q9HA38 289 aaKnown RBP7.04□□□□□ -1.28
KARS-206ENST00000566249 TRPM5Q9NZQ8 1165 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 ZDHHC8Q9ULC8 765 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 DISP1Q96F81 1524 aa7.04□□□□□ -1.28
KARS-206ENST00000566249 TTC37Q6PGP7 1564 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 A0A1W2PPL8 197 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 DIRC3C9JPN6 131 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 ZNF185O15231 689 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 FAM20BO75063 409 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 CKBP12277 381 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 RHCEP18577 417 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 GCSHP23434 173 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 CACNB3P54284 484 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 NOMO3P69849 1222 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 RHDQ02161 417 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 EXOSC9Q06265 439 aaKnown RBP7.03□□□□□ -1.28
KARS-206ENST00000566249 TOB2Q14106 344 aaPredicted RBP7.03□□□□□ -1.28
KARS-206ENST00000566249 KIAA0753Q2KHM9 967 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 RABL3Q5HYI8 236 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 NOMO2Q5JPE7 1267 aa7.03□□□□□ -1.28
KARS-206ENST00000566249 RNF220Q5VTB9 566 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms